Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0099 ATGGAAGCCTCCACTCTCTCACGAATCGGCCTCGCCGGCCTGGCCGTCATGGGCCAAAACCTAGCTCTCAACATCGCCGAAAAAGGGTTTCCGATCTCCGTTTATAATCGGACGACCTCCAAGGTGGATGAAACGCTAGATCGGGCGCACCGCGAAGGCCATCTACCTCTCAGTGGCCACTACTCGCCTCGTGACTTCGTGCTCTCCATCCAACGGCCTAGATCCATTGTTATCCTCGTCAAGGCCGGCGCTCCCGTCGACCAAACCATTGCTGCTTTGTCTGAGCACATGGAGGCCGGGGATTGTATTATTGACGGTGGAAACGAGTGGTACGAGAACACCGAGCGCCGGATTGTGGAAGCTTCTGGCAAGGGCATTCTGTATCTGGGCATGGGCGTCTCCGGTGGCGAAGAGGGTGCGCGCCACGGCCCGTCGTTGATGCCCGGTGGATCTTATCAGGCGTATCAGAACATCGAGGATATTGTGAAGAAAGTGGCTGCTCAGGTCGATGATGGTCCCTGCGTTACCTATATTGGCGAAGGGGGTTCGGGGAATTTCGTGAAAATGGTGCACAATGGGATTGAATACGGCGATATGCAGTTGATTTCGGAAGCCTACGATGTGTTGAAGAACGTTGGAGGGTTGTCGAACTCCGAATTGTCTGACATTTTCGGTGAATGGAACAGGGGAGAGCTTGAGAGCTTCCTGATTGAGATTACAGCTGATATTTTCAAGGTGAAGGACGAGCATGGAGATGGGGAATTGGTGGATAAGATTTTGGATAAGACGGGGATGAAAGGGACCGGAAAATGGACAGTGCAGCAGGCCGCGGAGCTGTCCGTTGCAGCACCAACTATTGCAGCCTCTTTGGATTGTAGGTACTTGAGCGGCTTGAAGGAGGAACGAGAGGCTGCAGCTGGGGTTTTGAGCGAGGCGGGGTTGAAGGATGAGGTGGGGTTTGCCAGGAGTGGGGTCGATAAGAAGAGGTTGATTGATGATGTGAGGCAGGCATTGTATGCCTCAAAGATTTGTAGTTATGCTCAGGGAATGAATCTGTTGAGGGCGAAGAGTGTTGAGAAGGGTTGGAATTTGAATTTCGGGGAGTTGGCAAGGATTTGGAAAGGTGGGTGTATCATAAGGGCAGTGTTTTTGGACCGAATCAAGAAGGCATATCAGAGGAATCCAAATTTAGCAAGTTTGATTGTGGACCCTGAGTTTGCAAGGGAGATGGTGCAGAGGCAGGCAGCATGGAGGAGAGTCGTGGGCTTGGCGATTTCTGCAGGGATTAGTACTCCTGGAATGTGTGCTAGTCTTGCTTATTTTGATACATATAGGCGTGCAAGGCTTCCTGCAAATCTTGTGCAGGCTCAGAGGGACTTATTCGGGGCACATACTTATGAGAGGATTGATCGCCCAGGCTCATTTCATACCGAATGGACAAAACTTGCTCGAAAGAGTGATGCTGGTTTTGCTACCCTGAAATGA 1485 0.5152 MEASTLSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLDRAHREGHLPLSGHYSPRDFVLSIQRPRSIVILVKAGAPVDQTIAALSEHMEAGDCIIDGGNEWYENTERRIVEASGKGILYLGMGVSGGEEGARHGPSLMPGGSYQAYQNIEDIVKKVAAQVDDGPCVTYIGEGGSGNFVKMVHNGIEYGDMQLISEAYDVLKNVGGLSNSELSDIFGEWNRGELESFLIEITADIFKVKDEHGDGELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKEEREAAAGVLSEAGLKDEVGFARSGVDKKRLIDDVRQALYASKICSYAQGMNLLRAKSVEKGWNLNFGELARIWKGGCIIRAVFLDRIKKAYQRNPNLASLIVDPEFAREMVQRQAAWRRVVGLAISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERIDRPGSFHTEWTKLARKSDAGFATLK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0099 494 Pfam 6-phosphogluconate dehydrogenase, C-terminal domain 184 479 IPR006114 GO:0004616|GO:0006098
Vvi2g0099 494 Gene3D - 186 447 IPR013328 GO:0016491
Vvi2g0099 494 NCBIfam decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase 9 480 IPR006113 GO:0004616|GO:0006098
Vvi2g0099 494 PIRSF 6PGD 1 488 IPR006113 GO:0004616|GO:0006098
Vvi2g0099 494 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 448 481 - -
Vvi2g0099 494 Gene3D - 449 481 - -
Vvi2g0099 494 PRINTS 6-phosphogluconate dehydrogenase signature 173 201 IPR006183 GO:0004616
Vvi2g0099 494 PRINTS 6-phosphogluconate dehydrogenase signature 72 101 IPR006183 GO:0004616
Vvi2g0099 494 PRINTS 6-phosphogluconate dehydrogenase signature 125 150 IPR006183 GO:0004616
Vvi2g0099 494 PRINTS 6-phosphogluconate dehydrogenase signature 7 30 IPR006183 GO:0004616
Vvi2g0099 494 PRINTS 6-phosphogluconate dehydrogenase signature 255 282 IPR006183 GO:0004616
Vvi2g0099 494 PRINTS 6-phosphogluconate dehydrogenase signature 369 391 IPR006183 GO:0004616
Vvi2g0099 494 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 5 484 IPR006183 GO:0004616
Vvi2g0099 494 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 181 IPR036291 -
Vvi2g0099 494 Gene3D - 5 185 - -
Vvi2g0099 494 SMART 6PGD_2 184 480 IPR006114 GO:0004616|GO:0006098
Vvi2g0099 494 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 5 185 - -
Vvi2g0099 494 FunFam 6-phosphogluconate dehydrogenase, decarboxylating 186 447 - -
Vvi2g0099 494 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 8 179 IPR006115 GO:0050661
Vvi2g0099 494 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 182 481 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0099 Vvi-Chr2 871450 872934 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0099 K00033 - vvi:100241717 983.786