Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0097 ATGAAGGATTCCAACGTTGACCTTTTCGATCCTCGTACGATTATGGACTCAGATTTATCACCGTCCGGCGTGGCCGGAGGATCAGTATCCGACTCCGACTTCGCATTTGCTTTCAACGACAGTAATTTCTCCGATCGACTTCTGAGGATTGAGATCATAGCCGATTTGCCGGAGAGTAAGGGCGACGGCGAGGGGTGTAACAGTATTGCTGATTGGGCACGGAATCGGAAGCGACGGAGGGAGGAGATAAAGAAGGAAAACGCTGTTGATGTTCACCATGAGGAGCAGATTTTAAACTGTAACATGCCGGATACAGAGGATGGTGTGGCCTATGAAAATCAAGACGAGGAAGCTGTGGCTATGATTGAGGAATCCCCTCCAGGTGTTGGAATGAATTTGAGCCAACATGGTGATGAAGCTGGCCATAGCTCTGATTCATCCTGGGGAATGGACTGTTCTACTGTTCTTAGAGTCAAGACTCTACACATTAGCTCTCCAATTTTAGCAGCTAAGAGTCCATTTTTTTATAAGCTGTTTTCAAATGGGATGCGAGAGTCAGAGCAGCGACATGTTACTCTTCGAATTCATGCATCTGAAGAAGCTGCCCTAATGGACCTCCTGAATTTTATGTATAGTAATACTTTGTCAACAACCACACCTACTGCATTGCTGGATGTGCTGATGGCTGCTGACAAATTTGAGGTTGCTTCATGCATGAGATACTGCAGCCGGATGCTGCGGAACTTGCCTATGACTTGTGAATCTGCCTTACTGTATTTGGATCTTCCTTCTAGTGTTTTAATGGCTGAAGCAGTTCAGCCACTGACAGATGCTGCAAAGCAGTTTCTTGCTGGACGCTACAAGGATGTAACCAAGTTTCAGGAAGAGGTCCTAAACTTGCCGCTGGCCGGAATTGAGGCAGTGCTGTCCAGTGATGATCTCCAGGTTGCTTCTGAGGATGCTGTTTATGATTTTGTACTGAAGTGGGCCCGGATCCATTACCCAAAACTAGAGGACCGACGAGAAATCCTAGGTTCCCGCCTTGGCCGCCTTATCCGTTTTCCATACATGACCTGCCGGAAGCTGAAGAAGGTTTTGACTTGCAATGACTTCGATACTGAACTTGCATCGAAGGTCGTGCTGGAGGCTCTCTTTTTTAAGGCTGAGGCACCATACAGGCAGCGTTCCCTTGCTGCAGAGGAGGCTAGTTCCTCCTATCGTCGTTTTGTGGAGAGGGCTTACAAGTACCGTCCAGTCAAGGTGGTGGAGTTTGAACTGCCCCGTCAGCAGTGTGTCGTGTACCTGGACTTGAAGCGGGAGGAGTGTTTGAATCTGTTTCCAGCTGGTCGAGTTTACTCACAGGCTTTTCACCTGGGTGGGCAGGGATTTTTCCTGTCAGCCCACTGCAACATGGACCAACAAAGCTCATTCCATTGCTTTGGGCTGTTTCTGGGAATGCAAGAAAAGGGATCTGTCACATTTGCTGTTGACTATGAGTTTGCTGCAAGATCAAAGCCAACTGAGGAGTATGTGAGCAAGTACAAAGGGAACTACACATTCACAGGAGGAAAGGCTGTTGGATATCGTAACCTGTTTGGTATTGCTTGGAACGCTTTCATGGCTGATGACAGCCATTATTTCATCAATGGTATCCTTCATCTACGGGCTGAACTCACGATCAGGCAATGA 1689 0.4766 MKDSNVDLFDPRTIMDSDLSPSGVAGGSVSDSDFAFAFNDSNFSDRLLRIEIIADLPESKGDGEGCNSIADWARNRKRRREEIKKENAVDVHHEEQILNCNMPDTEDGVAYENQDEEAVAMIEESPPGVGMNLSQHGDEAGHSSDSSWGMDCSTVLRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRIHASEEAALMDLLNFMYSNTLSTTTPTALLDVLMAADKFEVASCMRYCSRMLRNLPMTCESALLYLDLPSSVLMAEAVQPLTDAAKQFLAGRYKDVTKFQEEVLNLPLAGIEAVLSSDDLQVASEDAVYDFVLKWARIHYPKLEDRREILGSRLGRLIRFPYMTCRKLKKVLTCNDFDTELASKVVLEALFFKAEAPYRQRSLAAEEASSSYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECLNLFPAGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVTFAVDYEFAARSKPTEEYVSKYKGNYTFTGGKAVGYRNLFGIAWNAFMADDSHYFINGILHLRAELTIRQ* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0097 562 FunFam BTB/POZ domain-containing protein POB1 143 271 - -
Vvi2g0097 562 PANTHER OS02G0260700 PROTEIN 16 561 IPR045890 -
Vvi2g0097 562 SUPERFAMILY TRAF domain-like 449 560 - -
Vvi2g0097 562 Gene3D Potassium Channel Kv1.1; Chain A 142 284 IPR011333 -
Vvi2g0097 562 ProSiteProfiles BTB domain profile. 150 219 IPR000210 GO:0005515
Vvi2g0097 562 Pfam BTB/POZ domain 150 247 IPR000210 GO:0005515
Vvi2g0097 562 Gene3D - 285 388 - -
Vvi2g0097 562 SMART BACK_2 265 367 IPR011705 -
Vvi2g0097 562 SUPERFAMILY POZ domain 145 247 IPR011333 -
Vvi2g0097 562 SMART BTB_4 152 250 IPR000210 GO:0005515
Vvi2g0097 562 FunFam BTB/POZ domain-containing protein POB1 284 388 - -
Vvi2g0097 562 CDD BTB_POZ_ZBTB_KLHL-like 151 233 - -
Vvi2g0097 562 Pfam BTB And C-terminal Kelch 273 365 IPR011705 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0097 Vvi-Chr2 863784 867713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0097 - - vvi:104881174 1113.6