Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0092 ATGGAAGGGGAAACATCCTGGATTGACTACCAATTCGATGATAATAGAACACAAGTGCTTGATTTGCGAGTGTTTGATTTGTACCCGGAGCTCAGTGATGATGATAAGAGTGATAACAATCTCGTTTCAATTGATTCAATCCTTCCTGATGATTTACTTGAACGAATTCTAGCGTTGCTGCCGATAGCTAGTATTTTCAAGGCAGCTGCTGTAAGTAGAAAATGGTGTGAGATAGTGCACTCTAGGAGATTCTTATGCAATGCTTCAAGGGTCTTGGTGCCGAAACCTTGGTACTTCATGTTCACCGGCTCTGATGAGCCCACTGGTTATGCTTATGACCCCATGGATCGGAAATGGTATAGCTTTCAACTCCCCCTTATTGAGACATCCAGCTGGTTTATTGCTTCATCATATGGTTTAGTTTGCTTCATGGACAATGACAGCAGGAGTGAGCTATATGTTTGCAACCTAATTACCAAAGACCACAGGAAACTTGTGGAGCCTCCAGGCCAAAAATTCTCTGATTATAGTGCTCTTGCAATATCGGTGGACAGTCTATCACACAGCTACACTGTTGCAGTTGTAAAATCTAAGCAAATCCCTAATAATTTTGTTCAGTGGAATCTTTCAATCCATTGTTATTCTTCAGAAACTGGGATGTGGGTATCTCCTGTTATGGAACTGATGACAGGCTGGAGAGGAGGAGATGACAGTGTGATTTGTGATGGGGTATTGTACTTCCTGGTTCACTCTACAACTTTGACCGGGAACCAACATGCTTTGGCCACTTTTAATCTTTCTAGCAGACCTTCCAATGGTTTGTCAATTGATAGTTTTATCCCAGTACCTTGCTCCCTCACCTGTGGCAGGCTGATGAACATGAATGGTAAGCTTGTAATGGTGGGAGGAATTGGGAAACACGATCGGCCAGGTATAATTAAGGGGATTGGCATCTGGGCTCTCAAGGGGAGGGACTGGGAGGAGGTTTCTCGCATGCCTCACAGGTTTTTTCAAGGATTTGGTGAATTTGATGATGTTTTTGCAAGCAGTGGCTTTAATAGTCTTGTATACATTCAGAGCTATGGAGCCCCTGCTCTGCTTGTGTTTGACATGAACTTGAGACAGTGGAAGTGGTCACAAAAATGTCCTGTGACAAAGAGATTCCCCCTTCAGCTTTTTACTGGTTTTTGCTTTGAACCTCGGCTTGAAATTGCTCCCTAA 1221 0.4333 MEGETSWIDYQFDDNRTQVLDLRVFDLYPELSDDDKSDNNLVSIDSILPDDLLERILALLPIASIFKAAAVSRKWCEIVHSRRFLCNASRVLVPKPWYFMFTGSDEPTGYAYDPMDRKWYSFQLPLIETSSWFIASSYGLVCFMDNDSRSELYVCNLITKDHRKLVEPPGQKFSDYSALAISVDSLSHSYTVAVVKSKQIPNNFVQWNLSIHCYSSETGMWVSPVMELMTGWRGGDDSVICDGVLYFLVHSTTLTGNQHALATFNLSSRPSNGLSIDSFIPVPCSLTCGRLMNMNGKLVMVGGIGKHDRPGIIKGIGIWALKGRDWEEVSRMPHRFFQGFGEFDDVFASSGFNSLVYIQSYGAPALLVFDMNLRQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0092 406 FunFam F-box/kelch-repeat protein At3g61590 41 88 - -
Vvi2g0092 406 FunFam F-box/kelch-repeat protein At3g61590 family 94 390 - -
Vvi2g0092 406 SMART fbox_2 48 88 IPR001810 GO:0005515
Vvi2g0092 406 ProSiteProfiles F-box domain profile. 42 88 IPR001810 GO:0005515
Vvi2g0092 406 Pfam F-box domain 47 86 IPR001810 GO:0005515
Vvi2g0092 406 PANTHER F-BOX FAMILY PROTEIN 37 403 IPR045048 -
Vvi2g0092 406 SUPERFAMILY Galactose oxidase, central domain 109 384 IPR011043 -
Vvi2g0092 406 Gene3D - 36 91 - -
Vvi2g0092 406 SUPERFAMILY F-box domain 46 120 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0092 Vvi-Chr2 836515 837735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0092 - - vvi:109121643 845.499