Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0085 ATGGGAGCCAGGAGTTTGGTAGTTCTTCTCTTCCTGATGCTCATCCTCTCTTTTTCTTCTGCCTATCAGGGCAAGAAGAAGCAATACAAACCATGTAAGCAAATGGTCTTGTATTTCCATGATGTTCTCTACAATGGCCAAAATGCAGCTAATGCCACTTCTGCAATTGTGGGTGCACCCCAATGGGGAAACCTTACCATCTTGGCAGATAAGTTCCATTTTGGCAATGTGGTGGTTTTTGATGACCCCATTACTCTTGACAACAACTTCCACTCCAAACCAGTTGGTAGAGCACAAGGCATGTACATATATGACACCAAAAACACCTTCACTTCTTGGCTGGGGTTCACATTTGTTCTCAACAGCACAGACTTTCAGGGCACCTTGAACTTCATGGGAGCTGACCCCATTATGGTGAAGACCAGGGACATTACTGTGGTGAGTGGGACAGGAGACTTCTTCATGCATAGGGGAATTGCCACTATTATGACTGATGCATTTGAAGGTGACGTATATTTCAGGCTTAGGGTTGATATTAAGTTGTATGAGTGCTGGTGA 558 0.4444 MGARSLVVLLFLMLILSFSSAYQGKKKQYKPCKQMVLYFHDVLYNGQNAANATSAIVGAPQWGNLTILADKFHFGNVVVFDDPITLDNNFHSKPVGRAQGMYIYDTKNTFTSWLGFTFVLNSTDFQGTLNFMGADPIMVKTRDITVVSGTGDFFMHRGIATIMTDAFEGDVYFRLRVDIKLYECW* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0085 185 PANTHER DIRIGENT PROTEIN 5 185 IPR004265 -
Vvi2g0085 185 Pfam Dirigent-like protein 32 177 IPR004265 -
Vvi2g0085 185 Gene3D - 17 181 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0085 Vvi-Chr2 785156 785713 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0085 - - vvi:100243235 372.859