Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0081 ATGCGAACCATAACGCTCTCGGAGAGCGTTCTGAGGACACATTCACTTCATTCTCCATGTCCCAAACCTCCCAAATTCTTCAGTTCTTACTTATTTTCTTTGAATTCTCGCGTCAAGGAACACAATTCAAAGCTTTCCCATCAATACCCACGTCTCGTTTTTTCAAGGTTCTCCAGAAGGTGGGGTGAAAACACATGTGGGAAGTTGTTTGGGCAATTTCTTGAAAAGGATTGGGAAAATTCAGATGGCATTGAGTTGAGGTATTGCTGGAATGGCAAAGCAAGTAAACAATTGTTGCACAATGTGGATGACTTTGGTTTTTCAGACAAGTCACCTGCAAAAATTAACTATAAAAGGGAAAATCACACAACTAGAAGTATCCCAGTTCTAGATACATCAATGGGTGGTTTGCTGAAGTTTATGCTGGTCTTTGGGTTTCTCACACTCCAAGACTCTCAACAGGCAGTTGCTGGTTCAGATTTTGCTAGTGGATTGCAGCTGAATTCTTATTTAGGGGACCTGGGCGACATTAGCACAGGTTTTGTTTCAGCATTCTTGCTGATTTTTTTCTCTGAACTGGGGGACAAGACCTTTTTCATTGCGGCACTTTTAGCAGCAAGGAACTCTGGTGCTGTTGTCTTCATTGGGACTTTTGGTGCTCTTGCGACAATGACAATCATATCTGTTGTTCTTGGACGGACTTTTCACTATGTTGATGAGATTCTTCCATTCAGATTTGGTGAAACTGATTTGCCCATTGATGATATTGCAGCAGTGTGTCTTTTGGTGTACTTTGGGGTTTCAACCTTGCTTGAAGCCAACTCAAGCAATGGTTTAAAAGCAGAAGAAGAACAGAAGGAGGCAGAGATTGCAGTTTCAGAATTTTCGGGAAATGGTGCTGGGATTTTATCTTCTGCTAGCACTGTCATTAGCACGTTCCTCCTAGTTTTTGTTGCTGAATGGGGAGACAAATCATTTTTCTCTACAATAGCACTTGCTGCAGCATCTTCACCTCTTGGAGTCATTGGAGGAGCATTGGCTGGTCATGGAGTGGCAACTTTGCTTGCTGTTTTGGGGGGTTCTTTACTGGGAACATTCTTATCAGAGAAGGTTATCGCCTACATTGGAGGTGTTCTTTTTCTCATCTTTGCTGCGGTAACATTGATTGAGATAGTAAGTTAG 1182 0.4222 MRTITLSESVLRTHSLHSPCPKPPKFFSSYLFSLNSRVKEHNSKLSHQYPRLVFSRFSRRWGENTCGKLFGQFLEKDWENSDGIELRYCWNGKASKQLLHNVDDFGFSDKSPAKINYKRENHTTRSIPVLDTSMGGLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGILSSASTVISTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLIFAAVTLIEIVS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0081 393 ProSitePatterns Uncharacterized protein family UPF0016 signature. 192 201 IPR001727 -
Vvi2g0081 393 Pfam Uncharacterized protein family UPF0016 311 384 IPR001727 -
Vvi2g0081 393 Pfam Uncharacterized protein family UPF0016 183 266 IPR001727 -
Vvi2g0081 393 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 176 389 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0081 Vvi-Chr2 765793 773178 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0081 - - vvi:100248452 753.436