Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0079 ATGAATGGAAAAAAGGGTAGTTATGAGATCAACATTCCATCAACTACCAAGGCTAAACAGCCTGAGAGCCGGAAGAAATCTGGTGGCGGCGGCGGCGGTGGAGGCTTCTCCTTCAAAGGTTGGATGTGGAGTGTGTGGGAATTTGGAAAAGAAGATAGCAACAGAGTAAAATTCTCACTAAAGGTGGGGCTTGCTGTCCTACTTGTGTCTTTGCTTATACTATTCCGGGCACCCTATGATGTGTTTGGCACCAACATCATCTGGTCCATCCTCACTGTTGCCATCATGTTCGAATATACAGTTGGGGCGACGTTTAACAGGGGATTCAACAGAGCGCTTGGAAGCGTGCTTGCAGGAATCTTTGCCATTGCTATTGCTCAGCTAGCTCTAAGTGCAGGCAGGGTTGCTGAGCCTTTTATCATTGGTGTGAGCATCTTCCTAATTGGGGCTATTACATCATTCATGAAGTTATGGCCATCTCTTGTGCAGTATGAGTATGGGTTCAGGGTCATACTTTTCACCTACTGTCTGATCATAGTCTCGGGATATCGGATGGGGAACCCGTTTAGGACTGCCATGGATAGGCTGTACTCAATTGCCCTTGGAGGGATTGTAGCAGTCCTGGTGAATGTGCTTGTTTTTCCTATATGGGCTGGGGAGCAGTTGCACAAGGAGCTGGTCAAAAGCTTTGATTCAGTGGCCGATTCACTTGAAGAATGCGTTAGAAAATACTTGGAAGATGATGGCTCAGATCATCCAGAGTTCTCCAAGACTGTCATGGACGAGTTTCCAGATGAGCCTGCATACCGGACATGCCGAAAAACATTGAACTCCTCTGCAAAACTAGAATCCTTGGCAAATTCAGCAAAATGGGAGCCACCACATGGGAAATTCAGGCACTTCTTCTATCCATGGTCAGAGTATGTCAAAGTTGGAGCAGTTTTAAGATATTGTGCATATGAGGTTATGGCACTGCATGGTGTTCTTCACTCTGAGATTCAGGCCCCATACAACCTTCGGCTCACATTCCAATCAGAAATCAAAGAAGCAACAAGCCAGGCTGCAGAGCTGGTGAGGTGCTTGGGAAAAGACGTGTCGAGCATGAAGCAAAGCATCAAGACTTCCCTACTGAAGAAGGTTCACAGCTCCACTGAGCGTCTCCAATATGCCATAGACCTCCATTCCTATCTCCTCACATGCCATTCCGACCCTCCTGACACCTCTTCCAAGCCTCTTTCCAAGCTCCTCTCCCATGCCGTCTCCTATGACCTCTCAGACCAGCTCAATGACCCCAATCCACAGACACAAGACACACCTTCCGGGACTCTCCCTCTCCCACTAGTGACGGCAGAGTCTTACCATGAGATGATGAGGAAACAGATGAGAAGGCTTCATTCATGGCCATCCAGAGAGGTGGACGCCTTTGAAGAAGACGGTGGCCTCTGTATGGACACCCTGCCGAGGATGAGGGCACTGGAGAGCACTGCAGCATTGTCCCTTGCCACCTTCACTTCCTTGCTGATAGAGTTCGTGGCTCGCCTTGATCACTTGGTTGAAGCAGTTGACCAGCTTGCAGTGATGGCCAAGTTTAACCATGAGAGCCTATAA 1608 0.4857 MNGKKGSYEINIPSTTKAKQPESRKKSGGGGGGGGFSFKGWMWSVWEFGKEDSNRVKFSLKVGLAVLLVSLLILFRAPYDVFGTNIIWSILTVAIMFEYTVGATFNRGFNRALGSVLAGIFAIAIAQLALSAGRVAEPFIIGVSIFLIGAITSFMKLWPSLVQYEYGFRVILFTYCLIIVSGYRMGNPFRTAMDRLYSIALGGIVAVLVNVLVFPIWAGEQLHKELVKSFDSVADSLEECVRKYLEDDGSDHPEFSKTVMDEFPDEPAYRTCRKTLNSSAKLESLANSAKWEPPHGKFRHFFYPWSEYVKVGAVLRYCAYEVMALHGVLHSEIQAPYNLRLTFQSEIKEATSQAAELVRCLGKDVSSMKQSIKTSLLKKVHSSTERLQYAIDLHSYLLTCHSDPPDTSSKPLSKLLSHAVSYDLSDQLNDPNPQTQDTPSGTLPLPLVTAESYHEMMRKQMRRLHSWPSREVDAFEEDGGLCMDTLPRMRALESTAALSLATFTSLLIEFVARLDHLVEAVDQLAVMAKFNHESL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0079 535 MobiDBLite consensus disorder prediction 1 33 - -
Vvi2g0079 535 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 39 533 - -
Vvi2g0079 535 Pfam Aluminium activated malate transporter 46 525 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0079 Vvi-Chr2 753241 756161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0079 46 532 Miscellaneous Gene Families AT3G18440 40.200 4.02e-112 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0079 - - vvi:100243329 1036.56