Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0067 ATGGAGATGATCAGAGGGACAACTCTGAAGACCTTTCTGCTAATTTCTCTTTCTGTGGTGGCAACGTTATCAGTATGTGAATCACTGCCTCTATCCACGAAGGGAAGATGGATAGTGGACGATGTGACTGGGCGGCGCGTGAAGCTGAAGTGTGTGAATTGGATTTCACACACAGAGAGTATGATAACCGAGGGGCTTCACTCTCAGCCAATAGGAGACATTGCTGATAAAATCAGTGAAATGGGTTTCAACTGTGTTCGTCTCACCTACCCTACTTTTTTGTGGACGAGGGTGGATTATTACAACAAGACTGTTGCGGAGTCTCTTGATTCTCTCAATGCGACTGAGGCCAAGGCCATGATCGCTGTTCAGAATCCTCGGTTCTTGAGTCTTCCCCTCAGGGAATCGTATGAACGGGTGGTTGGGGAGCTTGGGAGACGTGGGCTCATGCTTATACTTGATAACCATGTCAGCAAGCCAATGTGGTGCTGCGAAAGAGAGGATGGGAATGGGTTTTTCGGGGACAAGTTTTTCGACCCCGAGGAGTGGATTGAGGGCTTGTCACAAGTCGCCAACAGATTCAAGGACGAATCCCATGTGATCGGAATGAGCATGAGGAATGAGCTTAGAGGCCAGCGTTCAAACCAGAAGGACTGGTACAAATACATGAGGGAAGGAGCCAAGGCTATTCACAGCATCAATCCAAACCTTCTTGTGGTCGTTTCAGGCTTGAATTTTGACAATGATCTCAGCTTCTTGAAGAAAAAGCCTTTCAGGTTAACGCTAAATAACAAGGTGGTGTTTGAGGCACATTGGTACTCGTTCGACGCCACCGAGCAGTGGAATGACAAGCCGCCGGAGCAGGAGTGCAAAGACCGAGCACGAGAGTTCTATAGAGACGCAGGTTTCCTTACAGAGGGAGATAACCCTGCTCCTTTGTTTATAAGTGAGTTTGGTATGGATTTAAGAATGGGCAATGTGGTTGATAACCGATACTTCAACTGCTACCTCCCCACTGTTGCTGCTAAGGACCTCGACTGGGCGCTGTGGACTTTGCAAGCTAGTTATTACTACAGGCAGGGGAGCCTCTTCCTCGAAGAGGTTTACTCAGTGCTTGATTTCAACTGGGAGAAGCCTCGGAATCCACAATTCTTAGAGAAATTAACCATTCTCCAAGAAATGTTACAAGATCCAAACTCAGAGGCTTCACCATACTACGTAATTGTCCATGCAAAGAGTGGCTTATGTGTGAACGTAGACGGTGAGAAAAAGGTTCATGGAAGTGGCTGCCGGCACCGGACAAAATGGACCCACTCCGGAGATGGATGGCCTATTGAGTTGATGGGAAGTAACCTATGTCTGAAGGCTGTTGGTGATGGGCGGCCAGTGAAGGTCTCTACTGATTGTCGGAGCCAACAGTCTAGATGGAGAAGGGTTTCGAAAGAGAAGCTCCATTTGGCTGTGAGAGATGAACATGACCACACCGAGTCGCTGTGCCTGGACGCCTCAAGTTCAGACCCTTCTTCAATTGTAACCAGGAAATGTGCTTGTAAGGAAGGTGATCTCAATTGCCACCATGAGGAGCAAAGCAATTGGTTTCAGCTTGTCCCTTCAAATATACCCTAG 1626 0.4791 MEMIRGTTLKTFLLISLSVVATLSVCESLPLSTKGRWIVDDVTGRRVKLKCVNWISHTESMITEGLHSQPIGDIADKISEMGFNCVRLTYPTFLWTRVDYYNKTVAESLDSLNATEAKAMIAVQNPRFLSLPLRESYERVVGELGRRGLMLILDNHVSKPMWCCEREDGNGFFGDKFFDPEEWIEGLSQVANRFKDESHVIGMSMRNELRGQRSNQKDWYKYMREGAKAIHSINPNLLVVVSGLNFDNDLSFLKKKPFRLTLNNKVVFEAHWYSFDATEQWNDKPPEQECKDRAREFYRDAGFLTEGDNPAPLFISEFGMDLRMGNVVDNRYFNCYLPTVAAKDLDWALWTLQASYYYRQGSLFLEEVYSVLDFNWEKPRNPQFLEKLTILQEMLQDPNSEASPYYVIVHAKSGLCVNVDGEKKVHGSGCRHRTKWTHSGDGWPIELMGSNLCLKAVGDGRPVKVSTDCRSQQSRWRRVSKEKLHLAVRDEHDHTESLCLDASSSDPSSIVTRKCACKEGDLNCHHEEQSNWFQLVPSNIP* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0067 541 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 18 539 - -
Vvi2g0067 541 Pfam Cellulase (glycosyl hydrolase family 5) 70 353 IPR001547 GO:0004553|GO:0071704
Vvi2g0067 541 SUPERFAMILY Ricin B-like lectins 401 516 IPR035992 -
Vvi2g0067 541 Gene3D Glycosidases 28 396 - -
Vvi2g0067 541 Gene3D - 397 527 - -
Vvi2g0067 541 CDD RICIN 405 515 IPR000772 -
Vvi2g0067 541 SUPERFAMILY (Trans)glycosidases 30 362 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0067 Vvi-Chr2 666668 669028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0067 28 541 Glycoside Hydrolase AT1G13130 42.085 2.48e-147 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0067 K01179 - vvi:100262188 1120.15