Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0066 ATGAGAGGTCTTTATAGTTTGTTTGCTCGTGGACCAATGTATATTATTATGAAGGAGAAAAGAAGTATAGCTACCATTCTCTTCATTTCTCTTCTTCTCTTCGCCTCAGACTCTCATTCACTGCCTCTCTCCACCAGAGGAAGATGGGTTGTGGACGATGCGTCCGGCCAAAGAGTGAAGCTGGCCTGTGTGAATTGGATTTCCCACTTGCAGGCCATGGTGGTGGAGGGTCTCCACAAGAGGCCACTGAGAGAAATTGCTGGTGGGATCACTGCCATGGGTTTTAACTGCGTCCGCCTCACATGGGCGACCTACATGTTTACCAGGCCGTCTTATGGGAACCGGAGTGTGGCGGAGAGTCTTGGTGAGTTGGGCCTGAGTGAGGCCAAGGAAGGGGTGGCTAGGAACAATCCTGAGCTGTTGAATCTGAGTCTGGTAGAAGCCTATGAGGCAGTGGTAGATGAGCTTGGAAGGCATGGAGTGATGGTGGTGCTTGATAACCATGTGAGCAAGCCAAAGTGGTGCTGTGCTGAAGATGATGGGAATGGGTTCTTTGGAGATAAATATTTTCATCCCAAGGAATGGTTGCAGGGTTTAACCAAAGTGGCCCATCGGTTCAAGGATAAGTCTCAGGTGGTGGCCATGAGCATGCGAAACGAGCTACGAGGCCCAAACCAAACAGAACATATCTGGTATAAACAAATCCGAAAAGGAGGCAGAACTATTCATAGCATCAACCCAAATCTTCTCGTCATTGTTTCAGGGTTGGAGTTCGACACTGACCTCAGCTTCCTGAAGCAAAAGCCCCTGAAATTAAAGCTTCCCAACAAGGTAGTATTTGAGGCACATTGGTACTCCTTCAGCTCCATCACAGGCGGTGTGGAGTGGACTGAGCAGCCACTGAATCAAATCTGCCACAATCGGACCGAGTGGTTCGAGTCAGGAGCCGCATTTGTGGGCACCGGTTCGAACCCGGCTCCGTTTTTTCTGAGTGAGTTTGGTATAGATTTGAGAGGCGTGAACCCGAGAGACAACCGATTCTTCGGCTGCTTCCTTGCGTTCGTCGCCCAGAGGGACTTGGACTGGGCGCTCTGGACCTTGCAGGGCAGCTATTACTACAGAGATGGGGTTGTGGGGCAGGAGGAGACTTATGGGGTGCTGGATTACAACTGGGACAAGCCCAGGAATCCCAAATTCCTAAAGAGGATAAGGATTCTGCAAGACATTTTACAAGATCCCAATTCAAACGTTCCAAAGTACCACTTAATTTTCCACCCACGAAGCGGGCGCTGCGTGAGCGTTAAGGGAGAGGGCCAGGACCAGATTCATGGAAGGAATTGCAAGAAGGGAAGTAGATGGAGCCACGACGGGAATGGAGGAGCGATAAGGCTGATGGGCAGCGGGTTGTGTCTGAAGGCGGTTGGGGACGGGCTTCCTGCGAAGCTCTCAACTGACTGCAGCAGCCCCCAGGCGAGGTGGAAACTGATCTCCAAGTCCAAACTCCACATAGCTGCCATGGATGAGCAGGGGAAGCCCTTGTGCTTGGATGGGAAAAATTCAAACTCCTCTTCAATTTTAACAAGGACGTGTATATGTGCATTACAAGATGGAGATGGTTCCGATCTTGACTGCCTCACGAATCCGCAAAGGCAGTGGTTTAAATTCGTCCCCTCGAATCTGCCCTAG 1686 0.5065 MRGLYSLFARGPMYIIMKEKRSIATILFISLLLFASDSHSLPLSTRGRWVVDDASGQRVKLACVNWISHLQAMVVEGLHKRPLREIAGGITAMGFNCVRLTWATYMFTRPSYGNRSVAESLGELGLSEAKEGVARNNPELLNLSLVEAYEAVVDELGRHGVMVVLDNHVSKPKWCCAEDDGNGFFGDKYFHPKEWLQGLTKVAHRFKDKSQVVAMSMRNELRGPNQTEHIWYKQIRKGGRTIHSINPNLLVIVSGLEFDTDLSFLKQKPLKLKLPNKVVFEAHWYSFSSITGGVEWTEQPLNQICHNRTEWFESGAAFVGTGSNPAPFFLSEFGIDLRGVNPRDNRFFGCFLAFVAQRDLDWALWTLQGSYYYRDGVVGQEETYGVLDYNWDKPRNPKFLKRIRILQDILQDPNSNVPKYHLIFHPRSGRCVSVKGEGQDQIHGRNCKKGSRWSHDGNGGAIRLMGSGLCLKAVGDGLPAKLSTDCSSPQARWKLISKSKLHIAAMDEQGKPLCLDGKNSNSSSILTRTCICALQDGDGSDLDCLTNPQRQWFKFVPSNLP* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0066 561 CDD RICIN 420 530 IPR000772 -
Vvi2g0066 561 Gene3D - 418 538 - -
Vvi2g0066 561 Pfam Cellulase (glycosyl hydrolase family 5) 82 368 IPR001547 GO:0004553|GO:0071704
Vvi2g0066 561 SUPERFAMILY (Trans)glycosidases 41 399 IPR017853 -
Vvi2g0066 561 SUPERFAMILY Ricin B-like lectins 416 530 IPR035992 -
Vvi2g0066 561 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 29 559 - -
Vvi2g0066 561 Gene3D Glycosidases 40 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0066 Vvi-Chr2 662067 666143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0066 40 561 Glycoside Hydrolase AT1G13130 43.702 5.41e-155 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0066 K01179 - vvi:100257079 1128.24