Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0064 ATGGCTGAGAAGGATCAGTCCAAACCCTTGGCCCCTGCCGGCTACAATCTCCGCAGCGATGAGGAAGAAGCCATGTCCAGGGAGCTGAAGAAGCTTCCCCCGCGAAAATATATCAAGTGCTGCGGCTGCATAACTGCTCTCATACTAATCCAAGCTGTGATCCTCCTAGTTCTGGCTTTCACCATTTTTCGGGTAAAAGATCCGGTGATAAAAATGAATGGTATGAGAATCGGGCCGCTAGAGCTCGAGGATAGTACCAACCTGACGCTGGTTGCTGACGTCTCAGTGAAGAATCCCAACGTGGCGTCATTCATATTCAGCAACGCCACCACCTCCATCACCTACAATGGCACCGTGATCGGCCAGGCTCGAACCCCACCAGGAAAGGCCAAGGCCAGACGCACCCTTCGGATGAATGTCACAGTGGAGATCATTCCCGAGAAGATAATGGCAGTGACGAGGCTGCTGAGCTCCCGAGCAATCAATATTTCAAGCTACACTAGAATCGCAGGCCGAGTGAAGATAATCAAGATCATTAAGAAAAAATGTTGTCGTGAAACTGAACTGCACCATGATGGTTAA 582 0.5017 MAEKDQSKPLAPAGYNLRSDEEEAMSRELKKLPPRKYIKCCGCITALILIQAVILLVLAFTIFRVKDPVIKMNGMRIGPLELEDSTNLTLVADVSVKNPNVASFIFSNATTSITYNGTVIGQARTPPGKAKARRTLRMNVTVEIIPEKIMAVTRLLSSRAINISSYTRIAGRVKIIKIIKKKCCRETELHHDG* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0064 193 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 33 183 - -
Vvi2g0064 193 SUPERFAMILY LEA14-like 50 150 - -
Vvi2g0064 193 Pfam Late embryogenesis abundant protein 94 183 IPR004864 -
Vvi2g0064 193 Gene3D - 50 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0064 Vvi-Chr2 647600 648181 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0064 - - vvi:100246818 319.701