Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0061 ATGAGGGGGTTGCCGAAGCACGAGCGCCGATGGGCGTCCGATACGGTTCCTGGAAAAGCGATGAGCGCGGGCTCGTCGCCCGCGACCGAGAGTGGATCGGCGGAGGAGTTTGTGGAGGTGACGCTTGATCTGCAAGATGATGATACGATTGTGTTGAGGAGTGTAGAGCCGGCGACGGTAATTAATGTTGATCAGGAGGGCAGTGCCACTCCGGCATCGGCGTCGGGGTCGAGGTCACCGACGTCGATCAGGAGGAGTTCGTCGAGCAGGTTGCGGCAGTTCTCGCAGGAGCTGAAGGCGGAGGCGGTGGCAAAGGCGAAGCAGTTTTCGCAGGAGCTGAAGGCTGAGCTTAAGAGGTTTTCATGGAGCCATGGCCATGGCTCGCGCGCGATGTCTTCTGCGGTTGCTTCCGTGCATAGCGCCGGCGGTCCAGGCTCCGGATTCGACACCGCTTTAGCGGCTCGTGCTCTCCGTCGGCAGCGAGCTCAGCTCGACCGGACTCGGTCCGGTGCTCAGAAAGCTCTTCGTGGATTGAGATTCATCAGCGCCAAAACAAACAGCGTTGATGCATGGAACGAAGTTCAGAGCAATTTCGATAAGCTTGCCAAAGACGGTTTTCTAAACCGTTCCGATTTCGCACAATGCATAGGTATGAAAGATTCCAAGGAATTCGCGTTGGAATTATTCGATGCTCTGAGTAGGAGACGAAGATTGAAGATGGACAAGATCACCAGAGACGAGCTCTACGAGTTCTGGTCTCAAATCGCCGATCAAAGCTTTGATTCTCGACTCCAGATCTTCTTCGACATGGTGGACAAAAATGAAGATGGGCGCATCGCCGAGGAAGAAGTTAAAGAGATTATTATGCTCAGTGCTTCTGCAAATAAGTTATCCAGACTGAAGGAACAGGCGGAGGAGTATGCAGCCTTGATCATGGAAGAGTTGGATCCGGAGAGGCTCGGATACATAGAGCTATGGCAACTGGAGACGCTACTCTTACAGAAGGACACGTATCTGAACTACAGTCAGGCACTCAGCTACACGAGCCAAGCCTTGAGTCAGAACCTGGCGGGGCTGAGAAAGAGAAGCTCAATACAAAGAATGAGCACGAAGCTGTTGTATTATCTACAAGAGAACTGGAGGAGGATTTGGGTTATTTGCTTATGGGTTCTGATCATGGCTGGGTTATTTATGTGGAAGTTCTTTGAGTACAGGCAGACGAAGGCCTTCCACGTCATGGGTTACTGCCTCTTAACCGCTAAGGGCGCAGCCGAGACCCTCAAGTTCAACATGGCTCTCATCCTCTTGCCTGTTTGCAGGAACACCATCACTTGGCTCAGGTCCACCAAGCTGGGCCTCTTTGTACCTTTTGACGACAACATCAACTTTCACAAGACGATTGCTGGAGCCATTGTAGTTGGTGTTATTCTCCACGCGGGAAACCATCTTGCATGTGATTTTCCAAGACTTGAAAAGGCAACCCAAATAAATTATAACGATTACTTAATTGAATTCGGATCAGATAAACCAACCTATGCAGACCTGGTTCGAGGCAAGGAGGGTGTGACTGGAATTCTAATGGTGCTTTTAATGCTGATTGCTTTTACGCTTGCAACAAGGTGGTTTAGGCGGAGCCTTGTTAAGCTACCCAAGCCCTTTGATAGGATCACTGGCTTCAATGCCTTCTGGTATTCGCACCACCTTTTTGTCATTGTCTACATCTTGCTGATCATCCACGGAACTTATCTTTATCTTGTGCACAAGTGGTACCTCAAGACGACATGGATGTACCTTGCAGTTCCTGTCTGCCTATATGCAGGAGAAAGGACCTTGAGATTGTTTCGGTCTGGCTTCTATGCTGTCCGGCTTCTTAAGGTTGCTATTTATCCAGGAAATGTCCTCACATTGCAAATGTCCAAGCCCCCCCAGTTCCGTTACAAGAGTGGACAGTACATGTTTGTTCAATGCCCTGCAGTTTCTCCATTTGAGTGGCATCCATTCTCTATTACCTCAGCTCCTGGTGATGACTTCCTTAGCATTCACATCCGGCAACTAGGTGATTGGACACAAGAACTAAAAAGGGTATTTTCAGAAGCATGTGAGGCTCCTATAGCTGGGAAGAGTGGGCTGCTCAGAGCTGATGAAAGTACAAAGAAAAGTTTGCCAAAACTCTTAATCGATGGGCCTTATGGAGCTCCAGCACAAGACTACAAGAAGTATGATGTCCTGCTACTTGTTGGACTTGGAATTGGAGCTACGCCCTTCATCAGTATTTTGAAGGATTTGCTCAACAACATTGTCAAAATGGAGGAGCAGGATTCAGTATCAGATTTCAGTAGGATATCAGACCAGAGTGCTGGGACTACTGATTCTCCCTCCCTCAATAGGATCTCCCCGAAAAGAAGGAAAACTTTGAAAACCACCAATGCTTACTTTTACTGGGTAACCAGGGAGCAAGGTTCATTTGATTGGTTCAAAGGGGTCATGAACGAAGTTGCAGAGCTTGACCAAAGGGGTGTGATTGAGATGCACAACTACCTAACCAGTGTGTACGAGGAAGGAGATGCCCGGTCAGCTCTCATCACAATGGTCCAAGCACTCAACCATGCCAAGAATGGGGTTGACATTGTGTCTGGCACCAGGGTTAGGACACATTTTGCTAGGCCTAACTGGAAGAAGGTTTTTTCTAAAACAGCTACCAAGCACGCTAATGCAAGGATAGGAGTTTTCTATTGTGGTGCACCAGTCTTAGCCAAAGAGCTCAGCAGGCTCTGCTATGAGTTCAATCAAAAAGGTTCCACCAAGTTTGAATTCCACAAGGAACATTTCTAA 2832 0.4862 MRGLPKHERRWASDTVPGKAMSAGSSPATESGSAEEFVEVTLDLQDDDTIVLRSVEPATVINVDQEGSATPASASGSRSPTSIRRSSSSRLRQFSQELKAEAVAKAKQFSQELKAELKRFSWSHGHGSRAMSSAVASVHSAGGPGSGFDTALAARALRRQRAQLDRTRSGAQKALRGLRFISAKTNSVDAWNEVQSNFDKLAKDGFLNRSDFAQCIGMKDSKEFALELFDALSRRRRLKMDKITRDELYEFWSQIADQSFDSRLQIFFDMVDKNEDGRIAEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLAGLRKRSSIQRMSTKLLYYLQENWRRIWVICLWVLIMAGLFMWKFFEYRQTKAFHVMGYCLLTAKGAAETLKFNMALILLPVCRNTITWLRSTKLGLFVPFDDNINFHKTIAGAIVVGVILHAGNHLACDFPRLEKATQINYNDYLIEFGSDKPTYADLVRGKEGVTGILMVLLMLIAFTLATRWFRRSLVKLPKPFDRITGFNAFWYSHHLFVIVYILLIIHGTYLYLVHKWYLKTTWMYLAVPVCLYAGERTLRLFRSGFYAVRLLKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDFLSIHIRQLGDWTQELKRVFSEACEAPIAGKSGLLRADESTKKSLPKLLIDGPYGAPAQDYKKYDVLLLVGLGIGATPFISILKDLLNNIVKMEEQDSVSDFSRISDQSAGTTDSPSLNRISPKRRKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKTATKHANARIGVFYCGAPVLAKELSRLCYEFNQKGSTKFEFHKEHF* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0061 943 Coils Coil 290 310 - -
Vvi2g0061 943 SFLD NADPH oxidase subgroup (NOX) 96 943 - -
Vvi2g0061 943 MobiDBLite consensus disorder prediction 62 91 - -
Vvi2g0061 943 Pfam Respiratory burst NADPH oxidase 163 262 IPR013623 GO:0004601|GO:0050664
Vvi2g0061 943 Pfam Ferric reductase like transmembrane component 422 577 IPR013130 -
Vvi2g0061 943 MobiDBLite consensus disorder prediction 778 797 - -
Vvi2g0061 943 Pfam FAD-binding domain 619 733 IPR013112 GO:0016491
Vvi2g0061 943 SUPERFAMILY EF-hand 186 342 IPR011992 -
Vvi2g0061 943 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 616 736 IPR017927 GO:0016491
Vvi2g0061 943 FunFam Respiratory burst oxidase protein A 731 943 - -
Vvi2g0061 943 Gene3D - 164 280 - -
Vvi2g0061 943 Gene3D Translation factors 608 699 - -
Vvi2g0061 943 FunFam Respiratory burst oxidase homolog A 164 280 - -
Vvi2g0061 943 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 737 943 IPR039261 -
Vvi2g0061 943 CDD NOX_Duox_like_FAD_NADP 623 885 - -
Vvi2g0061 943 Gene3D - 731 943 IPR039261 -
Vvi2g0061 943 SFLD Ferric reductase subgroup (FRE) 383 943 - -
Vvi2g0061 943 PANTHER NADPH OXIDASE 224 943 - -
Vvi2g0061 943 MobiDBLite consensus disorder prediction 778 795 - -
Vvi2g0061 943 CDD EFh 239 289 IPR002048 GO:0005509
Vvi2g0061 943 Pfam Ferric reductase NAD binding domain 740 925 IPR013121 GO:0016491
Vvi2g0061 943 PRINTS Cytochrome B-245 heavy chain signature 722 735 IPR000778 GO:0016020|GO:0016491
Vvi2g0061 943 PRINTS Cytochrome B-245 heavy chain signature 745 762 IPR000778 GO:0016020|GO:0016491
Vvi2g0061 943 PRINTS Cytochrome B-245 heavy chain signature 522 545 IPR000778 GO:0016020|GO:0016491
Vvi2g0061 943 SUPERFAMILY Riboflavin synthase domain-like 619 732 IPR017938 -
Vvi2g0061 943 ProSitePatterns EF-hand calcium-binding domain. 272 284 IPR018247 -
Vvi2g0061 943 FunFam Respiratory burst oxidase homolog A 607 699 - -
Vvi2g0061 943 ProSiteProfiles EF-hand calcium-binding domain profile. 259 294 IPR002048 GO:0005509
Vvi2g0061 943 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0061 Vvi-Chr2 621838 631268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0061 1 943 Miscellaneous Gene Families AT1G64060 77.847 0.0 1538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0061 K13447 - vvi:100262101 1826.22