Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0060 ATGGTTTTCTTAAAATCAAGGTCAGTAACAGTCCATGAAGATCACCAACCTGAAGAAGAGTACATCGCCGCCGCCGCCAGTACCACCACCGGCGGGGACTGCAGGTCGCTGACAGTGTGGAGGAAGTCGCTGCTGTTCAGCTGTACAGGGTTTACTGTCATCGACTCGTATGGAGATCTGGTGTACCGGGTTGACAACTACATTGGACAGCGTCCGGGGGAAGTCACTCTCATGGATGCCTCAGGAAAGTCAGTCCTCACGGTTCGCCGTCGCAAGAACCTCAGACTAGTAGAAAACTGGCATGTCTATGAAGGCGAAGTGGGCGACACTTCTAGAACTAAAAGACCATCATCATCAAAGCAGCCCATATGCAGTGTGAAGAAACACATAAATATTCTACATGCTAACCACAATGTGCTTGCATACGTTTTTCTGGGGAATTCAGATAAAAGATATGCGTATAGGATTGAAGGGTCGTATGCAAATCGATCATGCAAGGTGTTGGATAAATCAAGGAGAGTGGTGGCTGAAATAAAGAGGAAGGAAGCCATGAATGAAGGAGTTTCATTTGGGGTTGAGGTTTTTCTTCTGATTGTATGCCCAGGCTTTGATTCTGGGTTTGCAATGGCTCTGGTTTTGCTACTGGATCAAATGTTTTCCTAG 663 0.4676 MVFLKSRSVTVHEDHQPEEEYIAAAASTTTGGDCRSLTVWRKSLLFSCTGFTVIDSYGDLVYRVDNYIGQRPGEVTLMDASGKSVLTVRRRKNLRLVENWHVYEGEVGDTSRTKRPSSSKQPICSVKKHINILHANHNVLAYVFLGNSDKRYAYRIEGSYANRSCKVLDKSRRVVAEIKRKEAMNEGVSFGVEVFLLIVCPGFDSGFAMALVLLLDQMFS* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0060 220 Gene3D - 30 220 IPR038595 -
Vvi2g0060 220 PANTHER - 35 219 IPR007612 -
Vvi2g0060 220 Pfam LURP-one-related 31 213 IPR007612 -
Vvi2g0060 220 SUPERFAMILY Tubby C-terminal domain-like 29 219 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0060 Vvi-Chr2 596530 597740 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0060 - - vvi:100253460 442.195