Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0046 ATGGCTAGTATTTCAAACTCGTTGCCGCTGAAGCATGGAATCTCTCTCTGGTGTCCTCAACATGCTTCTCTGAATCGGACCCGCCTTCCTTCTTCATTCGGATCATCAGCCTCAGCCAGACGTTACGGCGTCGTTTCGTGTGCTTTCGCTAACGAAAATCGAGAGTTTGTTATCGTCGGCGGTGGAAATGCCGCTGGGTATGCAGCACGGACTTTTGTTGAACACGGTATGGCTGATGGAAAGCTCTGCATTGTATCTAAAGAGGCATTTGCGCCATACGAGCGTCCTGCTTTGACAAAAGGCTATCTGTTCCCTCTGGACAAAAAGCCAGCACGATTACCTGGTTTTCATACTTGTGTTGGATCGGGTGGAGAGAGACAGACCCCTGATTGGTATAAAGAGAAAGGGATAGAGATGTTATATGAAGATCCAGTAACAGGTATTGATATTGAAAAACAAACCCTGATGACAAATTCAGGCAAACTCCTCAAGTATGGATCCCTTATAATTGCTACAGGTTGTACGGCATCAAGACTTCCAGATAAAATAGGAGGAAACTTACCTGGTGTTCATTACATCCGGGATGTTGCAGATGCTGATTCATTGATATCATCATTGGAGAAGGCACGGAAAGTTGTTATTGTTGGTGGTGGTTACATTGGTATGGAGGTTGCTGCAGCGGCTGCAGGTTGGAAACTTGATACCACGATTATATTTCCAGAGGATCATCTTTTGCAAAGATTGTTTACTCCTACACTTGCACGGAGATATGAAGAGTTTTATCAGGAGAATGGTGTCAAATTTGTGAAGGGAGCCTCTATCAAAAACATAGAAGCTGGTTCTGATGGACATGTAACTGCTGTAAAACTTGAAAATGGATCCACCATAGAAGCAGACACGATTATTATTGGTATTGGAGCAAAACCTGCTGTTAGTCCATTTGAAAGGGTGGGCATAAATACCACTGTGGGTGGAATACAGGTTGATGGTCAGTTCCGAACAAGTGTACCTGGAATCTTTGCAATTGGAGATGTGGCTGCATTCCCATTAAAGATGTATAACCGTATTGCACGAGTTGAACATGTTGATCATGCTCGTCGCTCAGCACAGCATTGTATAAATGCATTATTGACTGCAAAAACACATCTATACGATTATCTCCCATATTTTTACTCGAGGGTGTTTGAGTATGAAGGGAGCCCAAGGAAAATATGGTGGCAATTTTTTGGGGACAATGTTGGAGAGACAGTTGAAATAGGGAATTTTGACCCGAAGATTGCTACTTTCTGGATAGATTCTGGTAAACTGAAAGGGGTTCTCCTTGAAAGTGGCAGTCCTGAGGAATTTCAACTCCTTCCGAAGCTCGCAAGGAGCCAACCTCACGTTGATATGACCAAGCTTCAGAAGGCATCTTCGGTTGAGGAGGCACTAGAATTGGCTCATGCATACGTGCAAGCTGGAGCTGCAGTTTAG 1473 0.4399 MASISNSLPLKHGISLWCPQHASLNRTRLPSSFGSSASARRYGVVSCAFANENREFVIVGGGNAAGYAARTFVEHGMADGKLCIVSKEAFAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPDWYKEKGIEMLYEDPVTGIDIEKQTLMTNSGKLLKYGSLIIATGCTASRLPDKIGGNLPGVHYIRDVADADSLISSLEKARKVVIVGGGYIGMEVAAAAAGWKLDTTIIFPEDHLLQRLFTPTLARRYEEFYQENGVKFVKGASIKNIEAGSDGHVTAVKLENGSTIEADTIIIGIGAKPAVSPFERVGINTTVGGIQVDGQFRTSVPGIFAIGDVAAFPLKMYNRIARVEHVDHARRSAQHCINALLTAKTHLYDYLPYFYSRVFEYEGSPRKIWWQFFGDNVGETVEIGNFDPKIATFWIDSGKLKGVLLESGSPEEFQLLPKLARSQPHVDMTKLQKASSVEEALELAHAYVQAGAAV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0046 490 Gene3D - 179 306 IPR036188 -
Vvi2g0046 490 Gene3D - 57 372 IPR036188 -
Vvi2g0046 490 SUPERFAMILY FAD/NAD(P)-binding domain 52 350 IPR036188 -
Vvi2g0046 490 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 369 IPR023753 GO:0016491
Vvi2g0046 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 298 314 - -
Vvi2g0046 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 324 346 - -
Vvi2g0046 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Vvi2g0046 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 211 229 - -
Vvi2g0046 490 PRINTS FAD-dependent pyridine nucleotide reductase signature 165 183 - -
Vvi2g0046 490 PANTHER APOPTOSIS-INDUCING FACTOR 1 54 476 - -
Vvi2g0046 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 55 77 - -
Vvi2g0046 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 211 236 - -
Vvi2g0046 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 299 313 - -
Vvi2g0046 490 PRINTS Pyridine nucleotide disulphide reductase class-I signature 339 346 - -
Vvi2g0046 490 Gene3D - 389 475 IPR016156 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0046 Vvi-Chr2 450391 457076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0046 162 415 Acyl Lipid Metabolism Gene Families AT3G17240 23.308 7.82e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0046 K08232 - vvi:100253570 987.252