Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0045 ATGCCTGCAACTGAGTACCAGGGCTCCTTTCTGGGCCGCATCAGCATCCGTAGAAACCAGATTGCCTCTATGGATGGCAACCATGAGCAAGACCTTGAGGACCTTGAGATTTTCCAAAAACATGTTGCTGATCGCTTCTCTGATCTCCTTTCTGCATCTGATGCCACTGCTGATGCCTCCGTCGACCCTCTTCTTTCAATAGCTTGGCTGCGGAAGCTGCTTGATGTCTTTCTCTGTTGCGAAGCGGAGTTCAAGGCGCTGGTGTTTATGGGTCGTGACCCTTCGCATATCGCCAGGCCCCCTCTGGATCGTCTCATTCCTGAGTTGCTTGAACGGGTGGTGAAGGCGTTGGATGTGTGTAATGCGGTGACGCATGGGGTGGAGTCGGTTCGGCATTGGCACAAATTGGCGGAGATTGCAGTGACTGCGTTGGAACAGAGGCCGATTGGTGAAGGCCAAGTTCGGCGTGCGAAGAAGGCTTTGAGTTCTCTGGTGGCGTCAATGACAGTGGAGGACAAGGAGAGCATCAATTCCAAAGCGACGGAGCGAGCGTGGTCCTTCGGCCGGAGAGGCTCCAAGGACCGGATAGCCGGGCAGTTCCGATCGCTGTCCTGGACTGTGTCGAAGTCGTGGTCCGCGGCGAAGCAGATTCAGTTGATGTTAGGCAATATCGCGGCGCCGCGCGGCGCCGAATCCACCGGCCTGGCGTCGCCGGTGTTCGTGATGAGCATTGTCCTGTCGTTCGTAACATGGACCTTAGTGGCGGCGATTCCTTGCCAAGAAAGGAGTGGTTTGCCCACCCACTTCCCTATTCCACGGCAACTGCCTTGGGCACAATCGATTATTGGCCTGCAAGACCGAATTGGAGAGGACTGGAAGAAGAAGGAAAAGAAGGGTTCAGCTGGGTTGTTGGAGGAGATGCAGAAGATGGAGAAACTAGGGCAATCCCTGATCGAATTTGCCGATTCTTTCCACTTCCCTGCAGAGCCGGAGCGTGTGGAGGAGGTGGCTGCCCAGGTGACTGAACTGGCAGAGACTTGCCGGAAAATGGAGGAAGGTTTGGGCCCCTTGCAGCAACAAATCAGAGAGGTGTTTCACAGGATGGTGAGGAGCAGGGGAGAAATGCTTGATATACTGGATCAAGCTGGTAAAGTTTCTAGTCCAATTATGTGA 1173 0.5448 MPATEYQGSFLGRISIRRNQIASMDGNHEQDLEDLEIFQKHVADRFSDLLSASDATADASVDPLLSIAWLRKLLDVFLCCEAEFKALVFMGRDPSHIARPPLDRLIPELLERVVKALDVCNAVTHGVESVRHWHKLAEIAVTALEQRPIGEGQVRRAKKALSSLVASMTVEDKESINSKATERAWSFGRRGSKDRIAGQFRSLSWTVSKSWSAAKQIQLMLGNIAAPRGAESTGLASPVFVMSIVLSFVTWTLVAAIPCQERSGLPTHFPIPRQLPWAQSIIGLQDRIGEDWKKKEKKGSAGLLEEMQKMEKLGQSLIEFADSFHFPAEPERVEEVAAQVTELAETCRKMEEGLGPLQQQIREVFHRMVRSRGEMLDILDQAGKVSSPIM* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0045 390 PANTHER BPS1-LIKE PROTEIN 14 379 - -
Vvi2g0045 390 Pfam Protein ROH1-like 1 379 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0045 Vvi-Chr2 447132 448304 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0045 - - vvi:100248464 749.584