Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0033 ATGAAAGTGAACCAGAAGGATTCGGAAAAGGTGGGTTGGGATCAGATGAGGGGTTCATCGGGAAATCCCATTGCCGTGCCTGTGGCTCAGGCTCGGACCTTGCCGAAGTTGATGGTGTGGCTCATCCTCTTTGTTTCGGTGACATACGTCGTCTATACGTTGAAGCTTGTATCCACCTCTCGCGCCTGCGACGATGACCTCCTGATTACGCCACCGCTGATGACCGTTTTGTCGTCCGAAGCCAACGTCACGATGGGCGCTGCTACGGCGGAGGGGATCCGGAACCAGACGTCGACAACGGTGGCGCTACGGCGGGAAATCCCGGAGGCCCACAAGAGGACGGAGCTGCGGCACATCGTGTTCGGCATTGCGGCGTCGGCGAAGCTGTGGGACCAGAGAAAGAACTACATCAAGCTATGGTGGAAGCCGAAGGAAATGAGGGGGATAGTTTGGTTGGACAATCAGGTGAAGACCCGGAGCGACGAGGGGCTCCCGCCGGTGAGGATCTCCGGCGACACGTCGCGGTTCTCCTACACGAACAAGCAGGGGCACCCTTCCGCGATTAGGATCTCGCGGATCGTGTCCGAAACGTTCCGGCTGAGAATGAAGGACGTGAGATGGTTCGTCATGGGCGACGACGACACCGTTTTCATCACCGAGAATCTGGTTCGACTCTTAGCCAAATACGACCACAACCAGTACTACTACATCGGCAGCTTATCGGAGAGCCATTTGCAGAACATATACTTCTCCTACAGTATGGCCTACGGCGGTGGCGGGTTCGCAATTAGCTACCCATTAGCCAGAGCTCTTGAGAGAATGCAAGACAGGTGCATACAGAGATACCCAGGATTGTACGGCTCAGATGACCGAATGCAGGCTTGCATGGCTGAGCTCGGCGTTCCTCTCACAAAAGAACTCGGTTTCCACCAGTATGATGTGTATGGGAACCTTTTTGGGCTTCTTGCTGCGCATCCAGTGACACCCTTGGTGTCGCTACATCACCTTGATGTGGTGGAGCCCATCTTTCCCAATGTGACCCGGGTTGAGGCCCTCAAGCAGCTCATGGTGCCAATGAAGCTTGACTCTGCAGGTCTGATGCAACAGTCTATTTGCTATGACAAAGCAAAGGGCTGGACCATTTCTGTTTCTTGGGGCTTTGCAGTTCAAATTTTCCGGGGAATTTTCTCACCTCGTGAGATAGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAAAGCTGATTACACGGCTTATGCCTTCAATACGCGTCCAGTTAGCAGGAACCCATGCCAGAAGCCCTTTGTGTTCTACTTGTCAAGGGCAAGATTTGATTCTTCAATGAATCAAACAGTCAGTGAGTATGCTCGGCATCGTGTCCCTCACCCATTGTGCAGGTGGAAAATGGCTGATCCTGCTGATATTGACAGAGTGGAGGTTTACAAGAAACCCGACCCACATCTATGGCAAAGGTCACCGAGGAGAAACTGTTGCAGGATCCTGGACTCAAAGAAGAGATCAGCAAAAAACATGGCAATAGATGTGGGTGTATGTAGGGAGGGTGAGATCAGCGAAATATAG 1584 0.5227 MKVNQKDSEKVGWDQMRGSSGNPIAVPVAQARTLPKLMVWLILFVSVTYVVYTLKLVSTSRACDDDLLITPPLMTVLSSEANVTMGAATAEGIRNQTSTTVALRREIPEAHKRTELRHIVFGIAASAKLWDQRKNYIKLWWKPKEMRGIVWLDNQVKTRSDEGLPPVRISGDTSRFSYTNKQGHPSAIRISRIVSETFRLRMKDVRWFVMGDDDTVFITENLVRLLAKYDHNQYYYIGSLSESHLQNIYFSYSMAYGGGGFAISYPLARALERMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVTRVEALKQLMVPMKLDSAGLMQQSICYDKAKGWTISVSWGFAVQIFRGIFSPREIEMPSRTFLNWYRKADYTAYAFNTRPVSRNPCQKPFVFYLSRARFDSSMNQTVSEYARHRVPHPLCRWKMADPADIDRVEVYKKPDPHLWQRSPRRNCCRILDSKKRSAKNMAIDVGVCREGEISEI* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0033 527 Pfam Protein of unknown function, DUF604 246 499 IPR006740 -
Vvi2g0033 527 Gene3D - 107 360 - -
Vvi2g0033 527 PANTHER FRINGE-RELATED 35 524 - -
Vvi2g0033 527 FunFam Fringe-related protein-like 106 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0033 Vvi-Chr2 343265 345918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0033 1 527 Glycosyltransferase AT4G23490 68.539 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0033 - - vvi:100267372 1078.54