Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0028 ATGCTGAGTACAGTTGGTTTGGAACTTACTAGCCTTATCAATTCTGACTTGACTTGGAAGAAGGCTTCAAAAGGTAGGAGCGCATCCAGACGGGCTAGGAAACCAGTTGCAAGGTGTTCAAAAGCTGGTGGGGAGCTTGTCAATAAGGATCCCAAAAGGGTGGCCATGCCAGTTTCTGAGTCGGAGAAGCTTGGAGTGAGTGTTCTTGGGTGCCGCTTCAGTGAAAAGGCAGAACACATACCAATTAAAAAACGGAGATTTTTGTTCAGGTCTCCTTCACCACCATCTAAAAACTCTTCTCCACGGTCTGAGGAGACCACTGATGATGCTGCTGCTGCTTCTGGTACTGACTTGGGTAAAATTGTTGATACTGAACTTGATTGTGATAGGAAGAACTTGGTCAAGGTAAACGAATTTCCTGGTGCCAATGAAGATTTCTCAGGTATTTCAATACTTGCAGCTGCTGCATGCAGTAGCAGCATGGGAGGAGAAGATGGTTTTGAGGAGGGGGTTTCCCGAGATGGAGAATCTTCTGCACATGAGGGTCCTCTTGATGTTTTGGTGAATAATGAATTATGTTCGTTGTCAAAGGGATTTCCCATGGAAGACCTTGTGAGTTCTGCTAAAGTTTCTACTGAAGAAGCTGGTTCCTGTTCTTCCCCAGTGCCCGAAAAAGAACTTGCTGCCTCATCAAGAACTGAAAATTCCTTACTAAAATGTCAGGCACATGGACAAAACATGGAGGGCACATCTTTTCCAGATAGTCATGTGACTGTGTCACAAGATCTTTTAAGAAATAAGGATGATGAAACAGCTAGAACACATGAGTCTTCCTTGCGAGATGATCGATCACATTGGGATTTAAATACTGCAATGGATGCATGGGAACGTCCTTTTGAGTATCAATGTTGCGATCCTCAGTTTAATGTTGGAGATAGCATCTCTGAAGATGTTGATGATGGTAAGACTAGTGATAAGATGGAGAAGTCTGAAGGCTGTGAATTAGAGAGGGAATCCGGAGGAACCAATGGAAAGATACTGCTGCCAAGTGACTCAAGTGGATTGGCTCAGACTCAAGAATTGAATATAGAGGAACATGGATCTGATTCAGACTCTGGTATTAATGAGTCTATCTGTTTACAAGAAAAGTTTGTTTCTTCTTCTGAGATCATCAATGCCTCAAAGACTGATCTACCTCAAGAATTGGAATCCTTGCATAATCAAGAAATAATCAGTCTTGATGCTGGATCTGTTGTTTCTGTTCCAGTTGAACATGATCAGGGCCTTTCAGTGTGTGCTAATGTGGATGAAAATGCCCCTGTCCAAAGTGTAGCATTTGGCTCTACTGGGAGTGGTGAGAGTCTATCTTCACATCAGCTGGCCAGTTTAGACTCCTGTACTGATAATTCTCTCTCCCTGAACTCTAATAATCTTACAAGCATTTGTATTTCTGAGGGCAACGATCTTGCAGTATCCACTGGCATTGCTATTGTGAATGATAGGAATGATTGTGCTGCTAAAACACCAAAAGATTCAACTATTCCATCTAGCTCTCAGGCTGAGAGGCAGGAGGCTGCTCCTCCACATGTGGCTTTCTCAGAGAATTCTATGTATGATTCTATGGATGTTCAGAAAGAAGATGCTGAGGATCCTGGGAGAAAACTCAGTTTATCTGAGGGTGTGCATGTCCACAAGGGTATGATTAGCTTGGAGACAGGTGAGGTACGAACTGTTGGTGATATTTTAGAGAATGCTGTCTGTAAATCAGATGAGGTGAGCTTCTCCCAATCTTCTCCAACATGTGCAGAGATGCCCAGTTCTGAAGCACTTCTTGGAGGTCAACCTGTGGTAGCAGAGGATGCTAAAGAGCAACATGGAAAAGTTTCTGTGGATGGTACTGATGCAAATGATACTCAAGTACATATTGACACGAGGGAGCTGACCAAATGTTCAGGAAAATCTGCTGAACTTTTAGGTGCATCCTCTGGTCTTAGCAGTCATAGTGAGTGCATAAGTGCTTCCAATGATCTTATGGATCATCCTGATAAGATGGCTGGCAGTGGCTATGATTCTGATGTTTCTCAAGATGATCCTGATCCTGTAGTTAGGATTGAAAAGGCAAGTGAGCTTCAGATGGATTATGATTCTCAGTATGAAGATGGAGAACTAAGGGAATCGATTGAATACACTTGGGAAGACCTTGGTGGGGAGGATGGCGAAGGTGAACATGTGGATTATGGGTCAGATAACAGAGACATGGCTGGCTTTGGTGCTTCAGATTACCATGTCATGTTGGTTAAAGTTGAGGGAGCAGAATGCAAGAGACAGAGAGTTTCTAACAATAAGAATTTGGGTTCTGAACCTGAACAATCTTGTCTTGGAAGCTCATCGATGACAAAAGTCGTAGAGGCAGTATCTGGTAAGGATGATGGTGCAAAATGTAGTTCACCATGCTTGAGCACACGGTTTTCAGGCAAAGATGATATTGATCAGTTTGATGCAAGTGCTGAGGTCAACAAAGAAACTGGTGCCAGACCTGATAATGTGAGTGGGGACCATGAGATTCATGTCATGGAAGCTGATGCAGAGGAAGCAAGCCAAGATGATGATTTGAAAATGAAAATTTCTGGATGGGATCTGTTGCCAGAGAATTGCAAAAGTTCTTCAGATATAGCGATGGAGCTTGGAGATGGCAGTGGTAGGAAGAATATTTCTGGTGATTCTGTAGATGGATTGAATACTGAAGATACTGAGACAAGGATGGTTAAGTCAAGAACATTCAAGAGGGAGTTGTTGTCACGTATTGAAGGACCGGTGTCTGGTGATGTGTTCTTAGGAAAGCATAGACTATGCACACAGGGAAGCAGATCCAATGATGCTGATGATTCAAATTCCAGATCTGAAAGAGAGTCTGGCTCTGTGAAATCCTTTGGAAGGAGTAGTTACTCTCTGCACATTCACTCTAGAGGTCGGGGAAGTGAGCATTGGGCTGATTATCCAGATGGCCACAGGGCCCCAAGACGACATCATTCATCTGGTTATCGCAGCATTACTGGGTTTAGTTTCCCAGGGCCAGAAAATGCTGCAGCCGTGTTCACTAGCAGACAAAGCACGAGTGTTTCATCACATGGTGTGCGTCGAGCTCTTAGAAGAAGTGGATCGCCAGCTGAAGGGGATGAGGCTTTTGGTATGCGTCTGGGTCTTAGACCAGCAGGAGAGATTAGCCCTGATAGGCATATGGGTATTGGCAGGGAAAGGTCTTTAAGATATGGTCCACGGCTTGATGATAGAGGCCCTAGGGGAAGGTATGATGGGCATGTGCTTGATGGCTGCATTGAATCTTCCTTGAATTATTCACATCCTTTAGCTAAGAGAGAAAGAAGTTTTTCTCCCATTGAAAGAAGAGGGGATCCTTCTGCACGTCAGTCCCACACAAAATCTCCATCTAGATCCAGAAGTCGCTCCCCCAATACTTGGCAATCTCCAAGGGGAAGAAATGGGGCTGGTGTTGTAGGAAATCCCTGTCTTAGACACCGAAGCAGGTCTCCTAGTTTCCGGTCTGGAGCCCGAGTGCAAAGAATAAGATCCCCTCATCAACGGTCTGGTTTTGCATCAGATCATATGGTAGGATTCATGTCAATGCCACGAAATCATGGTTCCCCACCACATAATTCTAGATGGATTGGTGATAGGAAGGATGGGATGGTTCACTTTAGGGAGCATGGTTAA 3729 0.4417 MLSTVGLELTSLINSDLTWKKASKGRSASRRARKPVARCSKAGGELVNKDPKRVAMPVSESEKLGVSVLGCRFSEKAEHIPIKKRRFLFRSPSPPSKNSSPRSEETTDDAAAASGTDLGKIVDTELDCDRKNLVKVNEFPGANEDFSGISILAAAACSSSMGGEDGFEEGVSRDGESSAHEGPLDVLVNNELCSLSKGFPMEDLVSSAKVSTEEAGSCSSPVPEKELAASSRTENSLLKCQAHGQNMEGTSFPDSHVTVSQDLLRNKDDETARTHESSLRDDRSHWDLNTAMDAWERPFEYQCCDPQFNVGDSISEDVDDGKTSDKMEKSEGCELERESGGTNGKILLPSDSSGLAQTQELNIEEHGSDSDSGINESICLQEKFVSSSEIINASKTDLPQELESLHNQEIISLDAGSVVSVPVEHDQGLSVCANVDENAPVQSVAFGSTGSGESLSSHQLASLDSCTDNSLSLNSNNLTSICISEGNDLAVSTGIAIVNDRNDCAAKTPKDSTIPSSSQAERQEAAPPHVAFSENSMYDSMDVQKEDAEDPGRKLSLSEGVHVHKGMISLETGEVRTVGDILENAVCKSDEVSFSQSSPTCAEMPSSEALLGGQPVVAEDAKEQHGKVSVDGTDANDTQVHIDTRELTKCSGKSAELLGASSGLSSHSECISASNDLMDHPDKMAGSGYDSDVSQDDPDPVVRIEKASELQMDYDSQYEDGELRESIEYTWEDLGGEDGEGEHVDYGSDNRDMAGFGASDYHVMLVKVEGAECKRQRVSNNKNLGSEPEQSCLGSSSMTKVVEAVSGKDDGAKCSSPCLSTRFSGKDDIDQFDASAEVNKETGARPDNVSGDHEIHVMEADAEEASQDDDLKMKISGWDLLPENCKSSSDIAMELGDGSGRKNISGDSVDGLNTEDTETRMVKSRTFKRELLSRIEGPVSGDVFLGKHRLCTQGSRSNDADDSNSRSERESGSVKSFGRSSYSLHIHSRGRGSEHWADYPDGHRAPRRHHSSGYRSITGFSFPGPENAAAVFTSRQSTSVSSHGVRRALRRSGSPAEGDEAFGMRLGLRPAGEISPDRHMGIGRERSLRYGPRLDDRGPRGRYDGHVLDGCIESSLNYSHPLAKRERSFSPIERRGDPSARQSHTKSPSRSRSRSPNTWQSPRGRNGAGVVGNPCLRHRSRSPSFRSGARVQRIRSPHQRSGFASDHMVGFMSMPRNHGSPPHNSRWIGDRKDGMVHFREHG* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 92 110 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 1078 1101 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 505 535 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 1126 1141 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 315 338 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 952 1012 - -
Vvi2g0028 1242 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 6 1231 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 1142 1164 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 988 1007 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 1122 1230 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 509 523 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 163 182 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 310 346 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 891 917 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 1070 1101 - -
Vvi2g0028 1242 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0028 Vvi-Chr2 310816 314773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0028 - - vvi:104881089 2364.34