Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0027 ATGGCTACAACTACAACCCACCTCAAAATCCAAACCCAACCCATTAAACCTAAGCGTCGGAGGTGTCGAGAAACTACCATTTCTGCTACTGCTTCGGCCGTCGCCACCGTTGGTGCCGCTGCCGAGTCGTCTGTTGGCCATTTGGGTCAGGTGGGTCGGAAGCTTGATCCGCCCACTGTGGTGTCTTCTGAGAGTTCTTGGTGTTGTCCCGCTTCTAAACCCTTTCCCGTTGGGCCTCCTCCGCCACCGCCGCCACCACCACTTCCGCGGCTGCCGACGGCGCTTCAGCGTCGTGGGGTCACCTCCTTGAGTTCGAGCCAAGAAACGGAACTAGTTCAGGGCAGCATTGCTTCGTCTCCTTCGGAGTCTCCGTCTCCGTCACTGGCACCGTCGACGTTTAAGATCCGATTCTCGCCGGGCACGAACTCGCCTGTGATGGACTTCACGCCGATTTCAGGGACTGCCATCAACGGCGGGGCCGCCCACGACTCGTTCCCTTCGAGCTTCAGTAAATTCAACTCCGCCCTCACCGCGGGGCTGCTGAACCCAATGTCTCCGCCTCCGCCGCCTCCGTCCGAAAAAACCCGATCGAGCCCGACCCTTTTCGAGATGATGGCGAGCGAGCCGGAATGTCAGCCGAGGCCCCAGATCGCGCCTAGTATGGGCCCCGTATCGGTTCTAAGGCCTCCAATTTCGGTTCAGGACAAGAGTGCGTTGATGATGCAACGAATATCGGAGATTCTAGCGAGTCGCAGTCCCGGAAACCAGTTCAACGACATGTCTTCTAGTGATATAAAGCTGACTTTGAGCTCAAAAGATGGTGTCAGCATTTCCATGAGCGTTCATCGGCAAATCCTTGTGGCTCACAGTAGATTTTTTGCGGCGAAGCTCTCGGATCGGTGGACGAGACAGCAGCAGCGATCTGCGAGTCCCTACATTGTGGAGATTGCGGATTGTGATGATGTTGAGATTTATATTGAAACGCTACGTTTGATGTATTGTAAGGATCTGAGGAAGAAGCTCATGAAGGAAGATGTGTCCAGGGTTCTTGGGATATTAAAGGTTTCAGCTGCTATCGAGTTTGATGCGGGTGTCTTATCTTGTTTGGAGTACTTGGAAGCGGCTCCATGGGCTGAAGATGAAGAAGAGAAGGTGGCTGCTCTGCTATCAGAGCTCCGCCTTGAAGGTGTTGTTGCAGGAGAAGTCCTGAAGAGGGTTTCTGTTGAAATTACTGCTGGAACTGAAGAGAGTAATGAAAATGAAGAAGTGCTTCTCAAGCTTTTGCATGTAGTTCTCGAAGGCAAAGATGAGAAGGCAAGGCGGGAGATGAAAGGATTAGTGTTAAAAATGCTTCGGGAGAATGCTTCTCAGAATGATTTAAGGAAGGAGTCTCTGTACTCAGCTTGTGATGGCTGTTTGGAATTACTTCGCCTCCATTTTTTGCGGGCAGCAGCATCAGACTTGCAGGATGTAGGTCAGATTGCACGCCAAGCTGATAATTTGCATTGGATTTTGGATATTTTGATTGATAGACAGATTGCAGAGGATTTTTTGAAGACGTGGGCATCGCAATCTGAATTGTCTCATGCACACTCTAAAGTCCCTGTAGTTCATAGGTATGAGGTGAGTAGAGTCACTGCTCGGCTGTTTGTTGGGATTGGAAAGGGGCAGCTCTTGGCTTCAAAGGATGCTAGGTGCTTGCTTTTGCAGACTTGGTTGGTGCCATTTTATGATGATTTTGGGTGGATGAGGAGGGCATCGAAGGGCCTTGATCGACACTTAGTTGAGGACGGTCTCAGCAATACCATTCTTACTCTTCCTCTAGCTTGGCAACAGGAAATCTTGCTTGCTTGGTTTGACCGGTTTTTGAATTCTGGTGAAGATTGTCCCAATATACAGAGGGGGTTTGAAGTGTGGTGGAGGAGGGCATTTTGGAGAAGACATGGTAAGACAGAACGGCCTCGACAGTTGCGCATCACAACTGCAACCATTGAGAACTCATGA 2004 0.507 MATTTTHLKIQTQPIKPKRRRCRETTISATASAVATVGAAAESSVGHLGQVGRKLDPPTVVSSESSWCCPASKPFPVGPPPPPPPPPLPRLPTALQRRGVTSLSSSQETELVQGSIASSPSESPSPSLAPSTFKIRFSPGTNSPVMDFTPISGTAINGGAAHDSFPSSFSKFNSALTAGLLNPMSPPPPPPSEKTRSSPTLFEMMASEPECQPRPQIAPSMGPVSVLRPPISVQDKSALMMQRISEILASRSPGNQFNDMSSSDIKLTLSSKDGVSISMSVHRQILVAHSRFFAAKLSDRWTRQQQRSASPYIVEIADCDDVEIYIETLRLMYCKDLRKKLMKEDVSRVLGILKVSAAIEFDAGVLSCLEYLEAAPWAEDEEEKVAALLSELRLEGVVAGEVLKRVSVEITAGTEESNENEEVLLKLLHVVLEGKDEKARREMKGLVLKMLRENASQNDLRKESLYSACDGCLELLRLHFLRAAASDLQDVGQIARQADNLHWILDILIDRQIAEDFLKTWASQSELSHAHSKVPVVHRYEVSRVTARLFVGIGKGQLLASKDARCLLLQTWLVPFYDDFGWMRRASKGLDRHLVEDGLSNTILTLPLAWQQEILLAWFDRFLNSGEDCPNIQRGFEVWWRRAFWRRHGKTERPRQLRITTATIENS* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0027 667 MobiDBLite consensus disorder prediction 74 92 - -
Vvi2g0027 667 MobiDBLite consensus disorder prediction 97 133 - -
Vvi2g0027 667 MobiDBLite consensus disorder prediction 1 22 - -
Vvi2g0027 667 MobiDBLite consensus disorder prediction 74 133 - -
Vvi2g0027 667 Gene3D Potassium Channel Kv1.1; Chain A 236 375 IPR011333 -
Vvi2g0027 667 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 246 650 IPR038920 -
Vvi2g0027 667 ProSiteProfiles BTB domain profile. 263 341 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0027 Vvi-Chr2 303759 306240 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0027 - - vvi:100257094 1211.44