Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0011 ATGGCACATCAAGACCAGCCTCAGAAAACCCAGCTTTCTTATCAGCTCATCAAGACCTCAACCGCAGCCACCATCGGCGGCTCCTGCATGGTTCTCTCCGGCCTCACCCTCGCCGGGACCGTGATCGCCCTGGTGGTGGCCACGCCGCTGCTGGTGATATTCAGCCCTGTGCTGGTGCCGGCGGCCATAACGGTGTTCTTAGCGGCAAGTGGGCTGGTGGCGTCGGGAGGATTTGGAGTGAGCGCAGTGTCGGTGTTTTTATGGCTGTACAAATACGTAAGGGGACAGCACCCAGTTGGTGCAGACAGGCTGGATCGCGCACGAGACAAGCTGACGGGCAAGGCCATGGAGGTGAAGGAGCGGGCGGCAGAGCAGATTGGCACTAGAGGAACGCAGGGTTGA 402 0.602 MAHQDQPQKTQLSYQLIKTSTAATIGGSCMVLSGLTLAGTVIALVVATPLLVIFSPVLVPAAITVFLAASGLVASGGFGVSAVSVFLWLYKYVRGQHPVGADRLDRARDKLTGKAMEVKERAAEQIGTRGTQG* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0011 133 Coils Coil 101 121 - -
Vvi2g0011 133 Pfam Oleosin 15 125 IPR000136 GO:0012511|GO:0016020
Vvi2g0011 133 PANTHER OLEOSIN 9 120 IPR000136 GO:0012511|GO:0016020
Vvi2g0011 133 ProSitePatterns Oleosins signature. 39 61 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0011 Vvi-Chr2 140610 141011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0011 13 122 Lipid Metabolism Gene Families AT4G25140 62.727 1.99e-38 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0011 - - vvi:100854621 257.684