Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0010 ATGGCAACACCAGATGAAAGTTCTTCTGCTAAGAAGTGGCTTCCTCTCGAAGCTAACCCCGATGTTATGAACCAGTTCCTTTGGGGTCTTGGGCTTTTGGAAGATGAAGCAGAGTGTTATGATGTTTATGGTCTGGATGAAGAACTCTTAGCAATTGTTCCAAAGCCTGTCCTTGCTGTGCTGTTTCTTTATCCCATTACTACACAGAGTGAAGAGGAGAGAATCCTGCAGGATAGTACAAAAAGGGAGACTAGCAATAAAGTTTACTTCATGAGACAAACTGTGGGGAATGCTTGTGGAACAATTGGACTTCTCCATGCTATTGGGAATGTCACTTCAGAGATTAAGCTTGTTGAGGGATCGTTCTTGAATAGGTTTTTCAAATCCACTGCAAGCATGGACCCACTAGAGCGTGCAGCATACCTTGAGAATGACCAAGAAATGGAAGTTTCTCATTCGGTAGCAGCTACTGCTGGTGATACAGAGGCTTCAACTAATGCGGATGCTCATTTTATCTGCTTCTCATGTGTGGATGGAGAACTTTATGAACTTGATGGACGGAAGTCAGGAGCAGTATCACATGGTCCATCCTCGCCCAGTACCTTATTGCAGGATGCAGCCAAGGTCATACAGGGTATAATCCAAAAAAATCCTGACTCGATCAACTTCAATGTCATCGCAATTTCAAAGAAACTTGAGGGACCCTACTAA 711 0.436 MATPDESSSAKKWLPLEANPDVMNQFLWGLGLLEDEAECYDVYGLDEELLAIVPKPVLAVLFLYPITTQSEEERILQDSTKRETSNKVYFMRQTVGNACGTIGLLHAIGNVTSEIKLVEGSFLNRFFKSTASMDPLERAAYLENDQEMEVSHSVAATAGDTEASTNADAHFICFSCVDGELYELDGRKSGAVSHGPSSPSTLLQDAAKVIQGIIQKNPDSINFNVIAISKKLEGPY* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0010 236 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 13 214 IPR001578 GO:0004843|GO:0006511
Vvi2g0010 236 CDD Peptidase_C12_UCH_L1_L3 13 228 - -
Vvi2g0010 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 181 191 IPR001578 GO:0004843|GO:0006511
Vvi2g0010 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 15 32 IPR001578 GO:0004843|GO:0006511
Vvi2g0010 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 53 65 IPR001578 GO:0004843|GO:0006511
Vvi2g0010 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 165 176 IPR001578 GO:0004843|GO:0006511
Vvi2g0010 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 93 110 IPR001578 GO:0004843|GO:0006511
Vvi2g0010 236 FunFam Ubiquitin carboxyl-terminal hydrolase 7 231 - -
Vvi2g0010 236 Gene3D - 7 231 IPR036959 GO:0004843|GO:0006511
Vvi2g0010 236 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 11 231 IPR001578 GO:0004843|GO:0006511
Vvi2g0010 236 SUPERFAMILY Cysteine proteinases 11 231 IPR038765 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0010 K05609 - vvi:100244786 471.085