Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0007 ATGGGTGTGTTCGCTATATCTCTCTATCACCACTGCCGCAGAAATTTCTCATTCAACTACCATTACCAGAGTTGTAGAACTCTCATATTGCAGTCTGCTTTTGAATCAGTTAGAGTCCAGAGACTTTCCCACGACGATTCTGGTATTGTTGAGGTTCACTTGGATCGGCCTGAAGCCAAGAATGCCATTGGGAAGGAGATGCTGGGAGGTTTGCAAAACATTTTTGAAGCTATTAACAGAGACGCGTCTGCTAATGTTGTCATGCTAAGTAGTTCAGTTCCCAGGGTATTCTGTGCAGGTGCTGATTTGAAGGAACGCAAAACAATGAATCCTTCTGAGACTCGGTTTTTTGTCAACTCATTGCGCTCCACATTCTCATTATTAGAGGCACTCCATGTTCCTACTATTGCTGTTATTGAAGGAGCAGCACTGGGTGGTGGGCTAGAAATGGCTCTATCATGTGATCTTCGGATTTGTGGAGAAGATGCGGTATTGGGCTTACCAGAAACAGGACTTGCTATAATTCCTGGGGCTGGTGGAACTCAAAGACTTTCAAGATTGGTTGGAAAATCAATTGCAAAGGAACTCATATTCACTGGTCGGAAAGTTGGTGGCAGGGATGCAATGTCAGTAGGATTAGTCAATTACTGTGTTCCTGCTGGTGAAGCTCATTTGAAGGCACTTGAAATTGCTCAGCATATAAATCAGAAGGGTCCATTAGCATTGCAGATGGCAAAACGAGCTATCAATGAGGGGCTCGAGTTAGATATGGAATCAGCTTTGGCATTGGAAGAAGAGTGTTATGAACAACTTCTGAACACAAAAGATCGCTTAGAAGGTTTGGCAGCCTTTTCCGAGAAGCGGAAGCCCAGATATAATGGTGAATAA 888 0.4369 MGVFAISLYHHCRRNFSFNYHYQSCRTLILQSAFESVRVQRLSHDDSGIVEVHLDRPEAKNAIGKEMLGGLQNIFEAINRDASANVVMLSSSVPRVFCAGADLKERKTMNPSETRFFVNSLRSTFSLLEALHVPTIAVIEGAALGGGLEMALSCDLRICGEDAVLGLPETGLAIIPGAGGTQRLSRLVGKSIAKELIFTGRKVGGRDAMSVGLVNYCVPAGEAHLKALEIAQHINQKGPLALQMAKRAINEGLELDMESALALEEECYEQLLNTKDRLEGLAAFSEKRKPRYNGE* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0007 295 Coils Coil 268 288 - -
Vvi2g0007 295 Gene3D - 237 295 IPR014748 -
Vvi2g0007 295 FunFam Probable enoyl-CoA hydratase, mitochondrial 236 295 - -
Vvi2g0007 295 SUPERFAMILY ClpP/crotonase 34 294 IPR029045 -
Vvi2g0007 295 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 136 156 IPR018376 GO:0003824
Vvi2g0007 295 Gene3D - 31 236 - -
Vvi2g0007 295 CDD crotonase-like 41 234 - -
Vvi2g0007 295 PANTHER ENOYL-COA HYDRATASE-RELATED 33 290 - -
Vvi2g0007 295 FunFam Methylglutaconyl-CoA hydratase, mitochondrial 30 236 - -
Vvi2g0007 295 Pfam Enoyl-CoA hydratase/isomerase 46 294 IPR001753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0007 Vvi-Chr2 98813 103462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0007 46 293 Acyl Lipid Metabolism Gene Families AT1G60550 26.587 6.42e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0007 K05607 - vvi:100259474 567