Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0001 ATGGCACTTGAGATTGAAGAACATCCTGTTGAGTCACTCTCCTCAGGCCCCAAGCTATGTGTTAAAAATTTTGTTTGGTCAGAACACGAATGGCCATTGATAAATCACGATGACTTTGCTGATGGAGACGATATTCCAACGATAAGTTTGGAGGGAAATTTGAGTGGGAAGCCATGCCAAGACTATGACAAGGTGTGCCAAGTCATGGTGACTGCTTGTGAGAAGTGGGGGTTCTTCAAGTTGGTGGATCATGGGGTTGCTATAGAAACTGTGGAAAATGTGAAAGTTCAGTTGAATGAGCTTTTTGATCTTCCAATGGATCAGAAGCTGAAAGGGGCTCGATCCACAAGCTTGCCATTGGGGTATTGTGCCTCAAATCCTGAGTATGGACAAAATCTACCATGGGCAGAGATCTTACAATTGCTTCAATCACCACAACAGGTTGTTGCCTTTGCAAGAAAGGTGTTTGGTGATCAACATCAGCCATTTAGCAATGCAATGGTGAAGTACATGCAAGCATTGGACAAATTAGGAATGAAGATTTTTGAAATGTTGGCACATGGAATGGGGCTTCCTGATGACTTCTTTACAAAGAATTTTGAAGAGAAAGAGGCCACCATGATCAGGGTGAACAGATACCCTCCTTGTCCCCTACCTGAGAAATGTCTAGGGGTTGGGAGTCATTCAGACCCCCATACCCTAACAATATTGCTACAAGACGACGTGGGCGGTCTTCAGGTTTTGAAGAGTGACAACCAGTGGATCGGAATTCGTCCTGTCCCAAATTCATTTGTCATCAACATTGGCGACACCCTCGAAGCATGGACTAATGGGAGACTAAGGAGTGTAGTGCATAGAGCAGTGGTGAATAAGGAGAAGCACAGGCTATCAGTGGCATATTTCCTCAGCCCCGCAACCTCTGCCATCATAGATTGCCCTCCTCAGCTGATAGAGTCAAGCACCAACCTCAGAAAGTATGTGAGTTTCACTTGGGGAGAATTCAGAAAGGAGCTTTTGACACAAAAGAGGGTTGTGGGTAAAACTGCCCTCAACAGATATCTCATATCTCCTTGA 1074 0.4488 MALEIEEHPVESLSSGPKLCVKNFVWSEHEWPLINHDDFADGDDIPTISLEGNLSGKPCQDYDKVCQVMVTACEKWGFFKLVDHGVAIETVENVKVQLNELFDLPMDQKLKGARSTSLPLGYCASNPEYGQNLPWAEILQLLQSPQQVVAFARKVFGDQHQPFSNAMVKYMQALDKLGMKIFEMLAHGMGLPDDFFTKNFEEKEATMIRVNRYPPCPLPEKCLGVGSHSDPHTLTILLQDDVGGLQVLKSDNQWIGIRPVPNSFVINIGDTLEAWTNGRLRSVVHRAVVNKEKHRLSVAYFLSPATSAIIDCPPQLIESSTNLRKYVSFTWGEFRKELLTQKRVVGKTALNRYLISP* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0001 357 Pfam 2OG-Fe(II) oxygenase superfamily 208 304 IPR044861 -
Vvi2g0001 357 Gene3D - 11 345 IPR027443 -
Vvi2g0001 357 SUPERFAMILY Clavaminate synthase-like 21 341 - -
Vvi2g0001 357 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 304 IPR005123 -
Vvi2g0001 357 Pfam non-haem dioxygenase in morphine synthesis N-terminal 45 144 IPR026992 -
Vvi2g0001 357 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 45 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0001 Vvi-Chr2 12465 13764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0001 44 355 Glycosyltransferase AT5G59530 28.527 9.89e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0001 - - vvi:100854724 736.487