Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1624 ATGGTGAGGCTCACTGCAGACCTGATTTGGAAAAGCCCTCATTTCTTCAATGCCATCAGGGAGCGAGAATTGGATCTTCGAGGGAATAAGGTTGCTGTAATTGAGAACTTGGGCGCTACAGAGGACCAATTTGATACCATTGATTTGTCTGACAATGAGATTGTCAAGCTCGAAAACTTGCCTTATCTTAATCGGTTGGGTACTTTGCTTATCAACAACAATAGAATTACCCGTATCAACCCCAATATCGGAGAGTACTTGCCAAAATTACACACGCTAGTTCTTACGAACAACCGGCTTGTCAACTTGGCAGAGATTGATCCCCTTTCATCCTTTCCAAAGCTGCAGTTCCTTAGTCTCTTGGACAACAATATTACAAAGAAACCGAATTATAGGTTGTATGTAATTCACAGACTAAAGTCACTTCGGTTGCTAGATTTCAAGAAAGTAAAAAATAAGGAGAGACTGGAAGCAGAGAATTTGTTTGCATCTAAAGAAGTTGAAGAAGAGGCTAAACAAGAACCCCTGAAGACATTCACACCAGGTGAAATGCCAAATGCTTTAGAACCTGCAGAGGAACAACAGATACCAAAAGTGGTGGGCCCTTCACCAGAGGAACTTATAGCTATCAAGGCCGCAATTGTGAATTCACAGACTCTTGAAGAGGTTGCAAGGCTTGAAAAGGCATTGAAGTCAGGGCAGCTTCCAGCAGATTTGAAGAGTTTGGTTGAGAACACCAGGGCTGATGTTGTGAATGAAAAGGATGACAAAATGGTCTCCAGTAATCCAAATACAAGTCGAGATGAACCAAAAACTGTGGAAGAACAGAAGAATGATGATGTGGCACCAATGGAACAGGAATAG 864 0.4201 MVRLTADLIWKSPHFFNAIRERELDLRGNKVAVIENLGATEDQFDTIDLSDNEIVKLENLPYLNRLGTLLINNNRITRINPNIGEYLPKLHTLVLTNNRLVNLAEIDPLSSFPKLQFLSLLDNNITKKPNYRLYVIHRLKSLRLLDFKKVKNKERLEAENLFASKEVEEEAKQEPLKTFTPGEMPNALEPAEEQQIPKVVGPSPEELIAIKAAIVNSQTLEEVARLEKALKSGQLPADLKSLVENTRADVVNEKDDKMVSSNPNTSRDEPKTVEEQKNDDVAPMEQE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1624 287 MobiDBLite consensus disorder prediction 247 287 - -
Vvi1g1624 287 Coils Coil 153 173 - -
Vvi1g1624 287 PANTHER U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A 1 277 IPR044640 GO:0000398|GO:0030620
Vvi1g1624 287 SUPERFAMILY L domain-like 6 153 - -
Vvi1g1624 287 FunFam U2 small nuclear ribonucleoprotein A 1 175 - -
Vvi1g1624 287 Pfam Leucine-rich repeat 1 173 - -
Vvi1g1624 287 Gene3D Ribonuclease Inhibitor 1 175 IPR032675 -
Vvi1g1624 287 MobiDBLite consensus disorder prediction 246 287 - -
Vvi1g1624 287 ProSiteProfiles Leucine-rich repeat profile. 43 64 IPR001611 GO:0005515
Vvi1g1624 287 ProSiteProfiles Leucine-rich repeat profile. 89 110 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1624 K11092 - vvi:100264276 540.806