Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1619 ATGGGAGAAATGGAGTGCGTTGTGCAGGTTAGCAATAGACTGGACAACATGGTAGATACCTCCACAGAGGCAGAGCAGTGGAAGAAGAGGTCAATCTACAGAGTACCCACCTGCGTCACTGACCTAAACAAAAAGGCCTATAAGCCTCAGGCGGTGTCTTTTGGGCCTTACCATCATGGAGAGGAGCATTTGCAGACAATGGAGGATCACAAGCGCCGTGCTCTCCTTCATTTCTTCAAGAGATCAGACAAACCTATTAAATTGTTGGTGGAGTCTTTGGCAGAAGTGGTGCAAGATTTGAAGGATTCTTATGATTTGCTTGATCCCGCATGGCAAAAAGATACCAGCGCCTTCTTGCAACTGATGATTGTAGATGGATGTTTCATGCTGGAAATCTTGCGGACAGCTACTCATACAATGGATGACTATGATCCTAATGATCCCATATTCAGTGATCATGGTAGGCTCTACATCATGCCATATGTCAGGCGTGACATGTTGATGCTTGAAAATCAATTACCCATGCTGGTTCTCGACAAGTTGCTTGCTGTTGAAAGTGACAAAGCCAAGGACCCGGAGTTGATTAATAAGCTTATACTCAAGTTCTTTACAACCAGCAGTCCTGAGGCAGGAATGGGCAAATGCCTGCACGTGTTGGATGTGTACAGGAAGAGCCTGCTTCAGGAAGGTCCTGGTCGAAAACCACGTCACTACAAAACAAGAAGTCGTGCAGACAATGAACGTGGTGAAGAAATCATCAGGTCTGCAACAGAGCTTGATGAAGCTGGGATCAGAATGAAGAAAAGTCGTACCCAGAGCCTCAAAGACATCTCATTCAAAGGCGGGGTACTGAAGCTCCCTGTCATTGTTGTAGATGATACCACTGAGTCGATGTTCTTAAACCTCATAGCTTTTGAGCGGCTTCACGTTGGGGCTGGGAACGAGGTGACTTCCTTTATATTCTTCATGGACAACATCATTGACAATGCCAAGGATGTGATCCTGCTGCACTCCCGAGGGATTATCCAGAGCGCCCTTGGAAGCGACAAGGCTGTTGCTAAACTCTTCAATTCACTCTCCAAGGATATAACACTTGACCCTGACGGCCCCCTATATGGAGTGCATAAGAAAGTGAATGACTACTGCAGGAAGAGTTGGAATGAGTGGCGTGCCAATCTCATTCACACCTACTTCAGAAATCCGTGGGCTATTCTATCCCTTATTGCTGCAGCATTCCTTTTTGCACTCACCATAGCTCAAACTGTGTTTACCATCTATCCCTATTACCATCCTAGTGGTGACTCTTCCTCCTCCCCTTCTGATTCACTTCCACCAAAACGCACCCCGTCTCACCATTGA 1359 0.4643 MGEMECVVQVSNRLDNMVDTSTEAEQWKKRSIYRVPTCVTDLNKKAYKPQAVSFGPYHHGEEHLQTMEDHKRRALLHFFKRSDKPIKLLVESLAEVVQDLKDSYDLLDPAWQKDTSAFLQLMIVDGCFMLEILRTATHTMDDYDPNDPIFSDHGRLYIMPYVRRDMLMLENQLPMLVLDKLLAVESDKAKDPELINKLILKFFTTSSPEAGMGKCLHVLDVYRKSLLQEGPGRKPRHYKTRSRADNERGEEIIRSATELDEAGIRMKKSRTQSLKDISFKGGVLKLPVIVVDDTTESMFLNLIAFERLHVGAGNEVTSFIFFMDNIIDNAKDVILLHSRGIIQSALGSDKAVAKLFNSLSKDITLDPDGPLYGVHKKVNDYCRKSWNEWRANLIHTYFRNPWAILSLIAAAFLFALTIAQTVFTIYPYYHPSGDSSSSPSDSLPPKRTPSHH* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1619 452 MobiDBLite consensus disorder prediction 432 452 - -
Vvi1g1619 452 Pfam Plant protein of unknown function 32 416 IPR004158 -
Vvi1g1619 452 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 24 425 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1619 Vvi-Chr1 22865684 22867173 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1619 - - vvi:100259202 870.152