Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1604 ATGGAATCAGCAGACTCCATGGAACTCAAGGTAATCTCCTGCAAGCATCTCAAGGCCTTCAATTTCTTCCAGAAGCTAGTAGTCTATGCTGTGGTTTCCATCATCAGCGATGAATCCAAGAACAGCAATCAAAAGCATCAAATACAGTGCCTTCAGCGGCAAAAGACCCCGGTTGATAGGGATGGAAATGGGAATCCTGAGTGGAACCACCAGCTGCAGTTTGATCTCAGGGACATCTCACTTGCTGATTCTGCTAATTACTACGTCAAATTCAGTCTCCGCTGCGAGGGTATCGTCTTTGGGAACAAAACTATTGGTGAAGTTTGTGTTCCATTGAAGGAACTGATCGATGAGTTCAACAGAGCTGTCAGGTTTGTAAGCTATCAGGTCAGGACTACTGATGGAAAACCCAATGGCGTACTGAATTTTTCTTATAAACTGAACATAAAAGGAAGTGATTTACCAGCAGTTGAGGCACCAGAGGATGAACATCTTCCTTACCCCTCAGTGGAAGTTGAGGAGTTTCATGCTCCTAAAAAGGATAGTTGCTACCCTTCAGTGGATGTTTCTACCTTGCCAGCAATTAGTATATCCACTCCATATCATACACCGGAGTTCCATAACATGGGACCACCACAGCTGCCACTGCCACCGCCACCACCACCAGCAGCAGTTCCTATGATGATGGCTGGGGCCTATTATCATCCACTCCCATGCCCACTGGTGTATGCATCACAGCCTTATTATGATCATGGTCTCTGCAGGTACCCTAGCGCCGCTGGTGCTGTTGGAGGAGTGGAGGGGGCTGATGGTGATGGGTGGAGGATGGGACTAGGGACCATAAGAGATGGCTTCCAAGGTTCATGGACTTTCAGGCATCAGAGGAACCAAAGCATGTGCATGCCTACTTGCTAA 915 0.4754 MESADSMELKVISCKHLKAFNFFQKLVVYAVVSIISDESKNSNQKHQIQCLQRQKTPVDRDGNGNPEWNHQLQFDLRDISLADSANYYVKFSLRCEGIVFGNKTIGEVCVPLKELIDEFNRAVRFVSYQVRTTDGKPNGVLNFSYKLNIKGSDLPAVEAPEDEHLPYPSVEVEEFHAPKKDSCYPSVDVSTLPAISISTPYHTPEFHNMGPPQLPLPPPPPPAAVPMMMAGAYYHPLPCPLVYASQPYYDHGLCRYPSAAGAVGGVEGADGDGWRMGLGTIRDGFQGSWTFRHQRNQSMCMPTC* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1604 304 Pfam C2 domain 7 116 IPR000008 -
Vvi1g1604 304 CDD C2_SRC2_like 6 143 IPR044750 GO:0006952
Vvi1g1604 304 PANTHER INGRESSION PROTEIN FIC1 7 200 - -
Vvi1g1604 304 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 146 IPR035892 -
Vvi1g1604 304 Gene3D C2 domain 1 146 IPR035892 -
Vvi1g1604 304 SMART C2_3c 6 124 IPR000008 -
Vvi1g1604 304 ProSiteProfiles C2 domain profile. 1 127 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1604 Vvi-Chr1 22751021 22754140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1604 - - vvi:100245456 565.459