Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1594 ATGACCTCCGCAACCAAACACACATCTATCGTCTTCGTCTTCGTCTTCCTCATCCTCTGCGTTTGGTTCTCAGTCTCGTCATCCAAATCCACCGACCCGACTCCAACTCCATGGCCCCACCAATTCCACTCCATTCTCTTCATGAATTACAGCGGTGCTCTCGAAATAATCGATCTCTGGTATGACTGGCCCAACGGTCGAAACTTCAACATCATGCAGGACCAGCTTGGGGAGCTTGTGTACGACCTTGAGTGGAACAATGGAACTTCGTTCGTCTACACATTGGACGCCCCCAATAGGTGTCACACAGCACAGCTTGAGGTGGGGATTCTTCGCCCTAATTGGCTGGACGGAGCCAACTATCTGGGTCAGCACCAGGTCGATGGGTTCCTCTGCAACTTGTGGGAGAAGGTGGACTTCATTTGGTACTACGAGGATGTTGTCACCAAAAGGCCCGTGCATTGGCGCTTTTACACAGGAAGGACTGCACATGTGATGACATTCGAAGTGGGGGCAGTGCTTGAGGACACGAAGTGGCAGGCCCCAGTATACTGTTTTGAGAAGAAGACTGATACTGATACTGATACAGCTCTTCCAAAGGCGGACATTGGCTCTATGAGGCTGGATGGGATTCCTAGAGGTTCAATCAGGCTCCCAATGTAA 663 0.5098 MTSATKHTSIVFVFVFLILCVWFSVSSSKSTDPTPTPWPHQFHSILFMNYSGALEIIDLWYDWPNGRNFNIMQDQLGELVYDLEWNNGTSFVYTLDAPNRCHTAQLEVGILRPNWLDGANYLGQHQVDGFLCNLWEKVDFIWYYEDVVTKRPVHWRFYTGRTAHVMTFEVGAVLEDTKWQAPVYCFEKKTDTDTDTALPKADIGSMRLDGIPRGSIRLPM* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1594 220 PANTHER EXPRESSED PROTEIN 6 196 IPR038941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1594 Vvi-Chr1 22685772 22687622 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1594 10 200 Glycosyltransferase AT4G14100 66.667 2.28e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1594 - - vvi:100241990 457.218