Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g1587 | ATGCTTCTGAGAATGAAGTGGCGGTGGCATCTGAATTCACTGACATGCCAGCGCTCAGGGGGAAGGATTATGGAAAGACGAAGATGCGGTTTCCAGACTACACAGAAACAGCATCAGGCCTTCAGTATAAGAATGCAGGACTTGCGAGTGGGAAGTGGCCCTTCACCAAAGGTGGGGGAGACAGTAGTGGTTGATTGGGATGGTTACACCATAGGATATTATGGGCGCATATTTGAAGCTCGTAACAAGACAAAGGGTGGTTCCTTTCAGGGCGATGACAAAGACTTTTTTAAATTTAGAGTAGGATCACAGCAGGTAATACCAGCTTTTGAGGAAGCTGTTTCCGGCATGTCCCTGGGCAGTATCAGAAGAAAATTAGGACTGGGAAGATCAGTACAATGTACTGTTCACACAATCTATGCATACAATTTCAAGTTCCCCTTCACAGTGATGCAGGATCATAGTGCCTCCTGA | 474 | 0.462 | MLLRMKWRWHLNSLTCQRSGGRIMERRRCGFQTTQKQHQAFSIRMQDLRVGSGPSPKVGETVVVDWDGYTIGYYGRIFEARNKTKGGSFQGDDKDFFKFRVGSQQVIPAFEEAVSGMSLGSIRRKLGLGRSVQCTVHTIYAYNFKFPFTVMQDHSAS* | 158 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g1587 | 157 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP19, CHLOROPLASTIC | 42 | 124 | IPR044208 | - | |
| Vvi1g1587 | 157 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 59 | 121 | IPR001179 | GO:0003755 | |
| Vvi1g1587 | 157 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 55 | 124 | IPR001179 | GO:0003755 | |
| Vvi1g1587 | 157 | SUPERFAMILY | FKBP-like | 42 | 124 | - | - | |
| Vvi1g1587 | 157 | Gene3D | - | 24 | 143 | IPR046357 | GO:0003755 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi1g1587 | - | - | csin:114261518 | 172.94 |