Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1585 ATGGGGGTTTGGATTTGGGTTTTGGTTTTTGGGTTTGTTTGGGGAATTGGTGCTCATGGGCTTGACCGTCATCCACATACGGAGCGAATTTCAGGAAGTGCTGGTGATGTTTTGGAAGATGATCCAGTAGGAAGGTTGAAGGTTTTTGTGTACGAGCTTCCAAGCAAATACAACAAAAAGATCCTTCAGAAGGACCCCAGATGTCTCAACCATATGTTTGCAGCTGAAATTTTCATGCATCGGTTCCTCTTGTCCAGCCCTGTTCGAACCCTCAATCCTGAGGAAGCAGATTGGTTTTACACTCCAATATACACAACTTGCGACCTTACACCAAATGGCTTGCCATTGCCCTTCAAATCACCAAGGATGATGAGAAGTGCAATACAGCTCATTTCTTCAAACTGGCCTTACTGGAATCGGACAGAAGGGGCTGATCACTTCTTTGTTGTGCCTCATGACTTTGGAGCCTGCTTTCATTACCAAGAAGAGAAAGCTATTGAACGGGGGATTCTCCCATTACTCCAACGTGCAACCTTGGTTCAGACTTTTGGACAAAGGAACCATGTGTGCTTGAATGAGGGTTCAATCACAATTCCGCCATATGCTCCCCCACAAAAAATGCAGGCCCACCTAATTCCCCAAGAAACCCCTCGGTCCATCTTCGTTTACTTCCGTGGTTTGTTTTATGATGTGAATAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGGGCAGCAGTTTGGGAGAACTTTAAGGACAACCCGCTCTTTGACATCTCCACTGAGCACCCAACGACATATTATGAAGACATGCAACGTGCTATTTTCTGTCTATGTCCCCTGGGTTGGGCCCCTTGGAGCCCCAGGCTAGTTGAGGCAGTGATATTTGGCTGCATCCCTGTCATCATAGCAGACGACATTGTCCTACCCTTTGCCGATGCTATCCCATGGGAGGAAATTGGAGTGTTTGTAGCAGAAGAAGATGTCCCTAACCTTGACACCATCCTTACATCCATTCCACCAGAAGTAATCCTACGAAAACAGAGGCTGCTAGCTAATCCTTCAATGAAGCAGGCAATGTTGTTCCCCCAGCCTGCCCAATCAGGAGATGCTTTCCACCAGATACTGAATGGTCTAGCTCGCAAGTTGCCGCACAACAAGAATGTTTACTTGAAGCCTGGGGAAAATGCCTTAAATTGGACAGCAGGGCCTGTAGGAGACCTAAAACCATGGTGA 1239 0.4689 MGVWIWVLVFGFVWGIGAHGLDRHPHTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPIYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLNEGSITIPPYAPPQKMQAHLIPQETPRSIFVYFRGLFYDVNNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDVPNLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQSGDAFHQILNGLARKLPHNKNVYLKPGENALNWTAGPVGDLKPW* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1585 412 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 44 379 IPR004263 GO:0006486|GO:0016757
Vvi1g1585 412 Pfam Exostosin family 45 340 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1585 Vvi-Chr1 22621795 22625826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1585 K20870 - vvi:100852698 868.996