Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1580 ATGGCTCTAAGGCTGTTGTCTGCAACCTTCGTCACTGTTCCCAAACTTCAAATCTCGAAGAAGCGCGACGGCTTTACCGAAGCTAGGGTTTCGTCATCGCCGTCGATTTCTAGTATTTCGCGTAAAACCGGATCGATAAAATGTCAGGCTTTGGGAGAGAGCTCTGTTGATGGAGTCGTTAATCAAGGAATTTACGGTCCATGGACCGTCGATTCCTCCGACGTCCGAGAGGTGATTTTATACAGGTCAGGGCTAGTGACTGCTGCTGCTTCATTTGTAGTTGCTGCTTCAGCTGCTTTTTTGCCTGAGAACTCTTTACCTAGCAATGTAATCAATGAAAATCTTGATTTGCTTTATACACTTGGAGCTGGAGGATTGGGCTTATCTTTATTTTTGATTCACATCTATGTGACTGAGATTAAGCGCACTCTTCAAGCACTATGGGCACTAGGTGTTGTTGGATCTTTAGCAACATACACGAGCCTTGCACAACCAACTGGTGAGAACTTAATACAGTATGTTATTGACAACCCAACAGCTGTGTGGTTCATTGGCCCTCTTTTTGCAGCACTGACTGGACTTGTCTTCAAGGAAGGAAAGTTAAAAGGTTGA 612 0.4444 MALRLLSATFVTVPKLQISKKRDGFTEARVSSSPSISSISRKTGSIKCQALGESSVDGVVNQGIYGPWTVDSSDVREVILYRSGLVTAAASFVVAASAAFLPENSLPSNVINENLDLLYTLGAGGLGLSLFLIHIYVTEIKRTLQALWALGVVGSLATYTSLAQPTGENLIQYVIDNPTAVWFIGPLFAALTGLVFKEGKLKG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1580 203 PANTHER F3H9.20 PROTEIN 18 200 IPR019275 -
Vvi1g1580 203 Pfam Uncharacterized integral membrane protein (DUF2301) 128 199 IPR019275 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1580 - - vvi:100245345 355.525