Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1577 ATGGAGAATGAAGAGGGGCTTCAAGCAGATGGTGAATCAGATCCTAAAGCACCCATTCCAGTATCTGAAGTTGATGCTTGGGAAAACATCAGGGATGATGATATCATGCAACAACAGTCTGCGATTCGGGCCGAGGAAGCTGAGAAAGTTCCCTTCATCGGTGACAAGGAACCTCTTTCTGTATTAGCAGCTGAATATGAGTCAGGCAGCCCCATCTTGCTGAAGAAAATAAAGGTGCTTGGTGAAAAATATGGCTCTATCAGGCGAACTAGGGGAGATGGGAACTGCTTTTTTCGAGGCTTTATGTTTTCATACCTTGAGCATATTCTGGAGTCACAAGACCAAGCAGAAGTTGATCGCGTCACAACTAATGTTGAAAAATGCAGAGAGACACTTCAAGCTCTAGGTTATGCAGACTTTACTTTTGAGGACTTTTTTGCGTTATTCCTTGAGCAGCTGGAAAGTGTTGTCCAAGGAAAGGAGACTTCCATAAGTCATGATGAGCTTGTAATAAGGAGTCGAGATCAGTCCATATCCGACTATATTGTAATGTTCTTCAGATTTGTAACCTCTGGTGAAATAAAACGACGCTCAGAGTTTTTTGAACCCTTCATATTGGGAATGACAAATGCTACAGCTACAGTGGAGCAGTTTTGCAAGTCATCAGTGGAACCAATGGGCGAAGAGAGCGACCATGTGCACATTATTGCATTGTCTGATGCACTGGGTGTGCCAATCCGTGTTGTGTACCTGGACCGGAGCACTTATGATATTGATCATGTCATCGTAAATCATCATGATTTCATTCCCTCTGCTGGTGATCTTCCCAGTGCAGGTGGTGGGAGCTCTGAAACCACCAAGCCCATTGTGACTTTGCTATACCGACCAGGCCACTATGATATTCTTTACCTTAAGTGA 918 0.4401 MENEEGLQADGESDPKAPIPVSEVDAWENIRDDDIMQQQSAIRAEEAEKVPFIGDKEPLSVLAAEYESGSPILLKKIKVLGEKYGSIRRTRGDGNCFFRGFMFSYLEHILESQDQAEVDRVTTNVEKCRETLQALGYADFTFEDFFALFLEQLESVVQGKETSISHDELVIRSRDQSISDYIVMFFRFVTSGEIKRRSEFFEPFILGMTNATATVEQFCKSSVEPMGEESDHVHIIALSDALGVPIRVVYLDRSTYDIDHVIVNHHDFIPSAGDLPSAGGGSSETTKPIVTLLYRPGHYDILYLK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1577 305 CDD AtOTU1-like 51 303 - -
Vvi1g1577 305 Pfam Peptidase C65 Otubain 46 303 IPR019400 -
Vvi1g1577 305 ProSiteProfiles OTU domain profile. 85 272 IPR003323 -
Vvi1g1577 305 PIRSF OTUB 21 305 IPR016615 GO:0016579|GO:0016787
Vvi1g1577 305 Gene3D Peptidase C65 Otubain, subdomain 2 91 244 IPR042467 -
Vvi1g1577 305 MobiDBLite consensus disorder prediction 1 30 - -
Vvi1g1577 305 SUPERFAMILY Cysteine proteinases 52 303 IPR038765 -
Vvi1g1577 305 FunFam Ubiquitin thioesterase OTUB1 91 244 - -
Vvi1g1577 305 Gene3D Peptidase C65 Otubain, subdomain 1 51 303 IPR042468 -
Vvi1g1577 305 PANTHER UBIQUITIN THIOLESTERASE PROTEIN OTUB 30 303 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1577 K09602 - vvi:100262625 608.601