Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1573 ATGAAAATGGGGTTTGGTTTAGTTTTTCTGCTAGTTTTGAGTTTGGGTGTGTTTGATGTATGTGAAGGGAAAGGGAAGGGTTATGAAGAAGCAGTGAATTGTAAGAGGCTTGAGTGTGCTCCATATGAGGTGGTCCACTCCCAAAAGGACTATGAAATCAGAAGCTATACAACTTCTATGTGGATTTCGACTCCACCCCTCAATTCTTCCTCCTACAAGGATGCAGTTGGTAGAGGCTTTAACATCCTCTTTGCCTACATTCAAGGCAACAACGATCAAAGGGCAAAAATCGACATGACAGCACCAGTTTTGGTTGATATTTTCCCCTCCACAGGACCCTTCTGCAACTCATCCTTTATCATGTATTTTTATGTGCCCACTAAGTACCAAAACAACCCTCCTCTATCAGCCCAGGCTCACCAAGTGAAGCTCCCTAAACACAAGTATGCTGCTGTGAGGAGGTTTGGGGGATTCATGGATGATTCCAACATTCCCACTCAAGCATTGGCCTTGAGGAGAAGCCTCAAAGGCACACCCTGGGAGACCTCAATTTCAACCAAAAACAGAGTACTAACCTACAGTGTGGCTGGTTATAACTCACCATTTGAATATGAGAATCGTGTAAATGAAGTTATATTCTGGTTTGATAGACCCTGA 657 0.4353 MKMGFGLVFLLVLSLGVFDVCEGKGKGYEEAVNCKRLECAPYEVVHSQKDYEIRSYTTSMWISTPPLNSSSYKDAVGRGFNILFAYIQGNNDQRAKIDMTAPVLVDIFPSTGPFCNSSFIMYFYVPTKYQNNPPLSAQAHQVKLPKHKYAAVRRFGGFMDDSNIPTQALALRRSLKGTPWETSISTKNRVLTYSVAGYNSPFEYENRVNEVIFWFDRP* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1573 218 Gene3D Regulatory factor, effector binding domain 36 217 IPR011256 -
Vvi1g1573 218 PANTHER HEME-BINDING PROTEIN-RELATED 27 215 IPR006917 -
Vvi1g1573 218 Pfam SOUL heme-binding protein 37 213 IPR006917 -
Vvi1g1573 218 FunFam Heme-binding protein 2 37 218 - -
Vvi1g1573 218 SUPERFAMILY Probable bacterial effector-binding domain 32 215 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1573 Vvi-Chr1 22467217 22468084 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1573 - - vvi:100248984 438.343