Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1571 ATGGCGTCTTCTCAAGAGCCGGACGACGATTTCGGAGTCCGAGTCGAGAAGGTTTTCAGATCACTCAAGCCGGTTCATTCCTCTGACTCGACTTCGCTGTGGTCTGTTTCCGATACTGAGGTCGAAAAGCGGGACCAAAACCGGGAGGGAAAGAAAGGGACGGAGAAAGACGAGGAAAACGACGTCGTTTTGGGTTCGGAGGATCGGGAGGGTTTGGAGGTAGAGTCGGGGGACGGCCGGAGAGAGGCCGATGGTGGCTTCGAAGATCGCGGCGACGGCGGAGTTCGCGGTGGCGTGGAGAATGCTGGCGCGGGTGATGGGGAGGAGTGGGAGATCAGATCTTCGATAGGAATGGATCGAACGCTGGACGACGAGGAGGAAGAAGATCTGTTTGACAAAGTGGCAATGGGCAGGGAAAATGCTGGCGATCGCATATACATGAGAGATGCTACTGACCATGGGACTGGCTTAAACTCTCACAATGTTCTTACCCAATCACATGATGCCACCAAGGACCCACGAATTGACCACTTTGCTGCACAGATCGGGCTGAAAGAAGATAAAGTGGAAGCTCAAAATTTTAACTCTCCTCAGTCTTGTTGTAAATCTGCTTTAGATGTCAAGGAGCCTCAGCATCAAGAGTCTGCACATGATGGTGTAAAATCTATCTTGAAAAGAAAAGGTGATACAACCGTCCCCAAGTCCCAAAAACGTGTGAAGTTTGATCTTAGCAGAAACGATTATAACGAAGCACCAACAAGAGCCAAAGATTTTTTTTCAACAGATGCCAGCTTGGTAGAGATTGAAGTATCAGAAGATGACTCTCTGCTGACCAGAAATACTCGGGGAGTTCCAGATTATGTACTCAACTCTTCAAAATATACACACTATACTTTAGATTCCTCAAGTGATGTTATTGAAGATTCCAAAAGCCAGGCTTGCGTGGAGCTTCTTGAGCAGATGAAGAGGTCAAAGGCCGAGGAACTGGGTTTGGAGCTGAAGGATAATTCAGTTGATCTTCCCAAATCCCTAACCTTCATACCAAAGAAGAAGGTTTGTGATGCCAAAGTAGCTGATAGTAGCAGCCAAAAGAAAAATCAGGATGCTGGGTGCAAGGGATCCTTGCACCAAACCGGCTTCCCCATTGGCATTGCAGCTGGGGAAGTCCATCAAACCGAAGCTGGCATAGATGAAGAGCCAGACGCAATCCCTGCAGATAAAAGCCCAGGTTTTAAGAATCCAACCCGCCACTACCGGATGAAAACTACCTCTGATGACTGA 1281 0.4832 MASSQEPDDDFGVRVEKVFRSLKPVHSSDSTSLWSVSDTEVEKRDQNREGKKGTEKDEENDVVLGSEDREGLEVESGDGRREADGGFEDRGDGGVRGGVENAGAGDGEEWEIRSSIGMDRTLDDEEEEDLFDKVAMGRENAGDRIYMRDATDHGTGLNSHNVLTQSHDATKDPRIDHFAAQIGLKEDKVEAQNFNSPQSCCKSALDVKEPQHQESAHDGVKSILKRKGDTTVPKSQKRVKFDLSRNDYNEAPTRAKDFFSTDASLVEIEVSEDDSLLTRNTRGVPDYVLNSSKYTHYTLDSSSDVIEDSKSQACVELLEQMKRSKAEELGLELKDNSVDLPKSLTFIPKKKVCDAKVADSSSQKKNQDAGCKGSLHQTGFPIGIAAGEVHQTEAGIDEEPDAIPADKSPGFKNPTRHYRMKTTSDD* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1571 426 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 6 425 IPR029338 -
Vvi1g1571 426 MobiDBLite consensus disorder prediction 20 126 - -
Vvi1g1571 426 MobiDBLite consensus disorder prediction 388 426 - -
Vvi1g1571 426 MobiDBLite consensus disorder prediction 38 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1571 Vvi-Chr1 22452109 22455815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1571 - - vvi:104880872 796.964