Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1559 ATGCAGTTGAAGATGGCGACTCTCTCCAACCTCCTTGGCCCTCCGGAGCTACGCCGAGGAGCCAGTATGCACCAGCCACAAGATCCTCCCGCCGCCACCGGCGACGCCTTCATGGACTTGATGGTGGCGAACTTCAACTCAGCGAGGGTACTGCCAAAACCTCCGATGGGTTACACTGAGAACGCGTCCGCAACATTTCTCTCCTCCGGCAACCCCTGCCTTGACTTCTTCTTCCACGTCGTCCCCGACACTCCGCCGGAGGTTCTGAAGCAGCGGCTGGAGCTGGCCTGGAGCCACAACCCCCTCACCACCCTGAAACTTATCTGTAATCTAAGAGGTGTTCGCGGCACCGGCAAGTCCGATAAGGAGGGCTACTATACGGCGGGGCTTTGGCTCCACGGCCTCCATCCGAAAACGTTCGCGTGTAATGTAGAGTCGTTTGCCAATTTTGGGTACTATAAGGACCTGCTGGAGATTCTCTTCAGGCTGCTGGAAGGGCCCGACGTCCGGCGAATTGCGAAGAGTCAGCGGAGGATGAAGAACAAGAAGAGGGGCAACTATTTTGTACGAAAATTCATATTCGGACATGGCAAGTTGGGGAAGAATAAGAAGACGAAGAAAGGGAAACATAGGAGGTTGGCGATGGCGAAGAAGGCGGTGGAAAGGTATGGACGTGATCCTGATTACAGGTTCCTCCACGATCGGATCTCTGATCTCTTCGCCGAACATCTCAAGTCCGATCTCCAGCTGCTGAACTCCGGCAATGTCAACAAGATCAGCCTCGCCGCCAAGTGGTGCCCCTCCATTGACTCTTCGTTTGATCGGTCGACTCTTCTCTGCGGGAGCATCGCTCGGAAAATTTTCCCAAAATCTGATCCTGAATACGAAGGAGTTGAAGATGCTCATTACGCCTACAGAGTCCGGGACCGCCTGAGAAAGCAAGTGCTGGTCCCTCTCCGTCGAGCCCTGGAGCTGCCGGAGGTATACATGGGCGCGAACCGCTGGAGCGAGCTCCCCTACAACAGGGTCGCTTCCGTAGCCATGAAAACCTATAAAGAACGTTTTATTAAGCACGACGAAGCCCGTTTCTTTGAGTACCTTAGCAGTGTCAGGGCCGGAAAAGCCAAGATCGCCGCGGGCGCCCTGCTCCCACACGAGATAATCTCGTCATTGGAAGACGAAGATGGTGGGCAAGTTGCAGAGCTTCAATGGCAGAGAATGGTCGAGGACGTCTCCAAGAAGGGCAAACTGAAAAACTGCATCGCCGTCTGCGACGTCTCCGGCAGCATGTTCGGGATCCCAATGGAGGTCTCCGTCGCTCTCGGCATACTCGTCTCCGAACTGAGCGAAGATCCATGGAAAGGCAAGGTCATCACTTTCAGCAAGACCCCAGAGCTCCACATGATCACCGGCGAAGACCTCCGCTCCAAGGCGAATTTCGTGAGAGAAATGAACTGGGGAATGAACACAGACTTCCAGAAAGTGTTTGATCTGATCCTGCAAGTGGCGGTGAACGGGAAGCTGAGCCAAGACGCCATGATCAAGAGAATCATCGTCTTCAGCGACATGGAGTTCGACCAAGCTTCTGCAAACAGTTGGGAGACCGACTATGAAGCCATAAAGAGGAAGTTCAGGGAGAGTGGGTATGAGGCGGCCGTGCCGGAGATAGTGTTCTGGAATCTCCGGGACTCTCGGGCAACGCCGGTGCCGGGAACAGAGAAAGGGGTGGCGCTGGTGAGTGGGTTTTCAAAGAATCTTCTGACGTTGTTCTTGGAGAATGGTGGGGTTATGAATCCGGAGGCCGTCATGGAAGCCGCCATCTCTGGGGAAGAATACGATAAACTGATTGTAATGGACTGA 1860 0.5441 MQLKMATLSNLLGPPELRRGASMHQPQDPPAATGDAFMDLMVANFNSARVLPKPPMGYTENASATFLSSGNPCLDFFFHVVPDTPPEVLKQRLELAWSHNPLTTLKLICNLRGVRGTGKSDKEGYYTAGLWLHGLHPKTFACNVESFANFGYYKDLLEILFRLLEGPDVRRIAKSQRRMKNKKRGNYFVRKFIFGHGKLGKNKKTKKGKHRRLAMAKKAVERYGRDPDYRFLHDRISDLFAEHLKSDLQLLNSGNVNKISLAAKWCPSIDSSFDRSTLLCGSIARKIFPKSDPEYEGVEDAHYAYRVRDRLRKQVLVPLRRALELPEVYMGANRWSELPYNRVASVAMKTYKERFIKHDEARFFEYLSSVRAGKAKIAAGALLPHEIISSLEDEDGGQVAELQWQRMVEDVSKKGKLKNCIAVCDVSGSMFGIPMEVSVALGILVSELSEDPWKGKVITFSKTPELHMITGEDLRSKANFVREMNWGMNTDFQKVFDLILQVAVNGKLSQDAMIKRIIVFSDMEFDQASANSWETDYEAIKRKFRESGYEAAVPEIVFWNLRDSRATPVPGTEKGVALVSGFSKNLLTLFLENGGVMNPEAVMEAAISGEEYDKLIVMD* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1559 619 Gene3D von Willebrand factor, type A domain 405 592 IPR036465 -
Vvi1g1559 619 MobiDBLite consensus disorder prediction 13 33 - -
Vvi1g1559 619 CDD vWFA 423 548 - -
Vvi1g1559 619 PANTHER OS06G0652100 PROTEIN 5 619 IPR011205 -
Vvi1g1559 619 SUPERFAMILY vWA-like 419 549 IPR036465 -
Vvi1g1559 619 Pfam Domain of unknown function (DUF2828) 59 603 IPR011205 -
Vvi1g1559 619 PIRSF T31B5_30_vWA 528 619 IPR011205 -
Vvi1g1559 619 PIRSF T31B5_30_vWA 6 532 IPR011205 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1559 Vvi-Chr1 22304970 22306913 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1559 - - vvi:100257506 1200.27