Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1556 ATGACTGGCACATCAAAAGGTCAATCTCCACCATCCCCCAAGGCCAAAGAATCAGATTCTCAGCAACCGTCATATTCTTTGCCTAAATCTTCAGGCGAGGACACTAAGAAATGGGGAACACACGTGATGGGGCCACCAGCAGTGCCCACTGTACACCCAGACAACCAGAAGGCAGCCATGTGGAAGGGTGATCACCAGCAGATCTACCACCAGCCATACCTTCAGTTCGCCCCAGTTGAGAAGCCCAGAAACAACCCTTTTGAGCCTGTCATTCATACCTTCAATTCATGGAGCAGAAAGGCTGAGATCATTGCCAGAAACATCTGGCACAACTTGAAAATGGGGCACTCGGTGTCAGAAACTGCATGCGGAAAGGTGAATTTGAGGGCAAAGGCCATGACAAGGGGTGGATTTGAGTCTCTCTACAAGCAGACTTTCGCAACAGATCCCAACGAGAGGTTGAAGAAGACCTTCGCCTGTTACCTCTCCACCTCCACTGGCCACGTTGCCGGCACCCTCTATCTCTCAACCGCCCGTTTGGCTTTCTGCAGTGACCGTCCCTTGTCCTTCACTGCCCCATCTGGGCAGGGGGCTTGGAGCTACTACAAGGTTGTGATACCTTTGGGGAACATAGGCACCGTCAACCCGGTGACTATGCGAGAAAATCCATCGGAAAAGTACATCCAGATTCACACCATTGATGGCCATGACTTCTGGTTCACGGGGTTCGTCAATTTTGAGAAGGCGACCCAACATCTCTTGAGCATTGTCTCAGAGTTCAGAGCCCATGCATGA 795 0.5132 MTGTSKGQSPPSPKAKESDSQQPSYSLPKSSGEDTKKWGTHVMGPPAVPTVHPDNQKAAMWKGDHQQIYHQPYLQFAPVEKPRNNPFEPVIHTFNSWSRKAEIIARNIWHNLKMGHSVSETACGKVNLRAKAMTRGGFESLYKQTFATDPNERLKKTFACYLSTSTGHVAGTLYLSTARLAFCSDRPLSFTAPSGQGAWSYYKVVIPLGNIGTVNPVTMRENPSEKYIQIHTIDGHDFWFTGFVNFEKATQHLLSIVSEFRAHA* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1556 264 Pfam GRAM domain 142 256 IPR004182 -
Vvi1g1556 264 PANTHER GEM-LIKE PROTEIN 2 60 260 IPR037848 -
Vvi1g1556 264 MobiDBLite consensus disorder prediction 1 33 - -
Vvi1g1556 264 Gene3D - 138 259 IPR011993 -
Vvi1g1556 264 MobiDBLite consensus disorder prediction 1 46 - -
Vvi1g1556 264 CDD PH-GRAM_GEM 151 259 - -
Vvi1g1556 264 SMART gram2001c 140 218 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1556 Vvi-Chr1 22277196 22278155 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1556 - - vvi:100250606 555.444