Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1541 ATGGCTATGGCCATGGCCAACCATCACACACTAGGTCTTATCTTCGGTATCTTAGGCAACATTATCTCCTTCCTCGTATACTTCGCTCCTGCACCAACATTTTATCGAATATATAAGAGAAAATCAGCAGAAGGCTTTCATTCACTGCCTTACATAGTAGCACTCTTCAGTGCTATGCTATGGTTGTACTATGCTCTACTCAAGAAAGATGCATTTCTTCTGATTACCATTAACTCCTTCGGCTGCGCCATAGAGTCTTTCTACATTCTTCTGTACTTCTTTTACGCGCCGATGCAGGCCAAGAAACAAACTCTCAAAGTGGTCATTTCTTTGAATGTTGGGGTGTTCTCTATCCTTGTTGTCCTTATACAATTTCTTCTGAAAGGCTCAAATAGGATAAATGTTTTTGGGTGGATCTGTGCTTCATTCTCAGTGGCAGTCTTTGCAGCTCCTTTGAGCATTGTAGCCAAAGTGATTCGAACCAAGAGCGTCGAATTCATGCCTTTTTCCTTGTCCTTCTTCCTCACATTGAGTGCCATCATGTGGTTTGCCTATGGCCTTCTCAAAAATGACCCCTGTGTTGCTATTCCAAACATTCTGGGGGTCATATTGGGGCTGGTCCAAATGGTGCTGTATGGATTCTATAGGAATGCTGGCAAAGAAAAGATGGAGAAGAAGCTGCCGGAACACATAATTGACATGGTCATGCTGAGCACATTAGGCACATCTGACATCCATCCGATCGGAGCCCAGCAGAATGGGATCAAGAAAAGTGGTAGTGAAGATGTCAAGGATGATGAAGAAACTGGGAATCGCGAGAAAAGTACGGAAAATTCAGGTGAACTCCAGCCAAATGGAAGTACAGTTTGA 870 0.4345 MAMAMANHHTLGLIFGILGNIISFLVYFAPAPTFYRIYKRKSAEGFHSLPYIVALFSAMLWLYYALLKKDAFLLITINSFGCAIESFYILLYFFYAPMQAKKQTLKVVISLNVGVFSILVVLIQFLLKGSNRINVFGWICASFSVAVFAAPLSIVAKVIRTKSVEFMPFSLSFFLTLSAIMWFAYGLLKNDPCVAIPNILGVILGLVQMVLYGFYRNAGKEKMEKKLPEHIIDMVMLSTLGTSDIHPIGAQQNGIKKSGSEDVKDDEETGNREKSTENSGELQPNGSTV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1541 289 MobiDBLite consensus disorder prediction 249 289 - -
Vvi1g1541 289 FunFam Bidirectional sugar transporter SWEET 13 101 - -
Vvi1g1541 289 Gene3D - 130 228 - -
Vvi1g1541 289 PANTHER RAG1-ACTIVATING PROTEIN 1 17 229 IPR047664 -
Vvi1g1541 289 Pfam Sugar efflux transporter for intercellular exchange 135 217 IPR004316 GO:0016020
Vvi1g1541 289 Pfam Sugar efflux transporter for intercellular exchange 14 99 IPR004316 GO:0016020
Vvi1g1541 289 Gene3D - 14 102 - -
Vvi1g1541 289 FunFam Bidirectional sugar transporter SWEET 132 224 - -
Vvi1g1541 289 MobiDBLite consensus disorder prediction 258 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1541 Vvi-Chr1 22072631 22073978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1541 5 278 Miscellaneous Gene Families AT5G13170 55.235 3.65e-108 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1541 K15382 - vvi:100243643 564.688