Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1537 ATGCCCCCGACACACCCGCACTATAAACCTACCTTTTCCCACCACCATTCTCTCCACGCCTCCCGTGCTGTTCAGATGTACTACCACCACTCCGAATCTTGGGGATACTATACGGCGGCAGCGGCAGCGGCAGCGGCGGCGAGAGTCATGGCGGATCCGCTGGAGCGAGTGGCGAGGCTGGCGTCGGAGAATGCGGTGGTGATCTTCAGCCTCAGCTCCTGCTGCATGTGCCATGCCGTGAAGAGGCTCTTCTGCGGAATGGGCGTGAACCCGACTGTGTACGAGCTGGACCAGGACCCCAGAGGGAAGGAGATTGAGCGGGCGTTGATGAGGCTGCTGGGGAACTCTCCGGCGGTGCCTGTGGTGTTCATCGGGGGGAAGCTCGTGGGGTCAATGGACAGTGTCATGGCTTCACATATCAATGGGACTCTGGTCCCTCTCCTCAAGGAAGCCGGAGCTCTCTGGCTCTGA 471 0.6072 MPPTHPHYKPTFSHHHSLHASRAVQMYYHHSESWGYYTAAAAAAAAARVMADPLERVARLASENAVVIFSLSSCCMCHAVKRLFCGMGVNPTVYELDQDPRGKEIERALMRLLGNSPAVPVVFIGGKLVGSMDSVMASHINGTLVPLLKEAGALWL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1537 156 CDD GRX_GRXh_1_2_like 65 147 - -
Vvi1g1537 156 ProSiteProfiles Glutaredoxin domain profile. 54 155 - -
Vvi1g1537 156 Pfam Glutaredoxin 66 129 IPR002109 -
Vvi1g1537 156 FunFam Glutaredoxin family protein 54 155 - -
Vvi1g1537 156 Gene3D Glutaredoxin 48 155 - -
Vvi1g1537 156 PANTHER GLUTAREDOXIN 55 156 IPR011905 -
Vvi1g1537 156 NCBIfam glutaredoxin-like family 57 156 IPR011905 -
Vvi1g1537 156 SUPERFAMILY Thioredoxin-like 54 155 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1537 Vvi-Chr1 22035762 22036232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1537 29 156 Miscellaneous Gene Families AT3G02000 59.701 1.76e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1537 K03676 - qsu:111995961 221.861