Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1536 ATGGATTTGATGATTGTTCTTGCTGTTTTTGTATCTTTGCTTGCTCACCCACTTCCCCTTGGGGCTCATCCAACAAAACCCATCTCTCGGATCGCGATAGTTGGTGCTGTTTTTTGTGATATCTGCTCCAACAACACCCTCTCAAGGCACAGCTACTTCTTGCCAGGTGTCGAGGTTCAAATTCAATGCAAATTAAGGGTAAATTCAGCTAGAACCAATGAAGAGATCAACTTCTCGGTCAATAGAACTACTGGTAAACATGGGGTTTACAAGCTTGAAATACCATCTGTTGATGGAATTGACTGCATAGGAGGTCACACAATGCAGACTCTTTGCCAGGCAAAGTTGATTGGGAGCTCATCATCAGCCTGCAATGTTCCTGGCTTGAAGACGACGACTAATGCCATCTCGGTGAAATCAAAACAGGACAACCTCTGCATCTTCAACTTGAATGCTTTGAGCTACAGACCATCCAAGAGGAACACCACAATTTGTGGAGATCAAACACAGGAATTGCCAAATGACTTAAATTCTGCAAAATTCTTTCTGCCTTGCTTTCCACCATTTGGCTTCCCTTGGCCTTCTTTACCTCCCCTACCTCCTCTGCCTCAGCTACCGCCTCTGCCTCAGCTACCTCCTCTGCCTCAGCTACCTCCTCTGCCTCGGCTACCTCCTCTGCCTCGGCTACCTCCTCTGCCAACATTGCCTTTTCCCTTTTCCCCATTGCCCCCATTTCCATCACTTCCATTTCCTCCATTACCATTCAAAACACCACCATCTCTACCCTTCCCTTTCCCTCCAACCCCACCTCTCTCCCTTCCTCCCCCTCCTCCGCCTGCGTTCAACTGGGGAGACCCCAGAACGTGGATACCACACATACCTTCCCTGTCTCCCCCTCCCCCACCAGCATTCAACTTGGGAGACCCCAAAACTTGGACACCCTACATCCCTTCACTAACCCCTCCTCCTCCACCAGCATTCAACTTGGGAGACCCCAAAACTTGGACACCCTACATCCCTTCACTAAACCCTCCTCCTCCAGCATTCAACTTGGGAGACCCCAAAACTTGGACACCCTACATCCCTTCACTAAACCCTCCTCCTCCAGCATTCAACTGGGAAGACCCCAGAACTTGGATTCCCTACTACTACCCTCCATCCCCTCCTACCAGCCCTCAGAACCAGCACCCCTGA 1194 0.5 MDLMIVLAVFVSLLAHPLPLGAHPTKPISRIAIVGAVFCDICSNNTLSRHSYFLPGVEVQIQCKLRVNSARTNEEINFSVNRTTGKHGVYKLEIPSVDGIDCIGGHTMQTLCQAKLIGSSSSACNVPGLKTTTNAISVKSKQDNLCIFNLNALSYRPSKRNTTICGDQTQELPNDLNSAKFFLPCFPPFGFPWPSLPPLPPLPQLPPLPQLPPLPQLPPLPRLPPLPRLPPLPTLPFPFSPLPPFPSLPFPPLPFKTPPSLPFPFPPTPPLSLPPPPPPAFNWGDPRTWIPHIPSLSPPPPPAFNLGDPKTWTPYIPSLTPPPPPAFNLGDPKTWTPYIPSLNPPPPAFNLGDPKTWTPYIPSLNPPPPAFNWEDPRTWIPYYYPPSPPTSPQNQHP* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1536 397 Pfam Pollen protein Ole e 1 like 33 130 - -
Vvi1g1536 397 PANTHER OS09G0508200 PROTEIN 218 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1536 Vvi-Chr1 22031147 22032416 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1536 - - vvi:100250599 367.851