Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1534 ATGCATTTCCAAATGACAATCGATCATGGGGCCGTTCCGATGTTTGTGAAACTTCCTGGTTCTCCAAGTGATGATGTTTGCGAGCATGCCGTGAACTGGGAGTGGCATTCTTGCGATCTGGTTAACACAAGCAAGTGCAAAGAAGGTTTATGCAGTGGAAGCAAGCTAGAGAAGGGGATTCACAGGAAGCTAGGTGTGGTTGCTGTCGATGATGGCCGTTGCTCTGGAATCGGTGCATTTACGCTTAGAAAAGGAAGGCTTGCTGTTAATGCTGAAGTTGCAACTGCATGGCGTGTGGGGATATTTAATCCGATAACAAGTGGAATAGGAGGTGGAGCTTTCATGATTGTTCAATCTTCATCAACCTCAAAATCCGAGGCTTTTGGCATGAGGGAAACTGCTCCCTTAGTTGCTCCACAAAACATGTATGAGAACAATCCCAGAGCCAAGTATCAAGGTACACTGGCTATGGGTGTTCTTAAGGAGATAGCTGGCCTTCGTGATGCTGGGTTGAAACATGGGTGA 525 0.4667 MHFQMTIDHGAVPMFVKLPGSPSDDVCEHAVNWEWHSCDLVNTSKCKEGLCSGSKLEKGIHRKLGVVAVDDGRCSGIGAFTLRKGRLAVNAEVATAWRVGIFNPITSGIGGGAFMIVQSSSTSKSEAFGMRETAPLVAPQNMYENNPRAKYQGTLAMGVLKEIAGLRDAGLKHG* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1534 174 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 61 174 IPR029055 -
Vvi1g1534 174 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 59 174 IPR000101 GO:0006751|GO:0036374
Vvi1g1534 174 Pfam Gamma-glutamyltranspeptidase 82 174 - -
Vvi1g1534 174 PRINTS Gamma-glutamyltranspeptidase signature 87 112 - -
Vvi1g1534 174 PRINTS Gamma-glutamyltranspeptidase signature 156 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1534 Vvi-Chr1 22005080 22006285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1534 65 174 Miscellaneous Gene Families AT4G29210 58.182 1.76e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1534 K18592 - vvi:100247429 166.392