Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1531 ATGGAGACGAAGAGCAGCTCAGTCACGTTGCTCCACAATGCTTTGATCGTGACAATGGATTCCGAGACTCGAGTGTTCTACAACGGCGCGATCGTCGTCGAAAAAGATCGAATCATAGCCCTAGGTCAATCTCACAACATCTTCAACCAATTCGCTCCTCTTGCTCAGAACGTCTTCGACCTTCACGGCCAAATTCTACTTCCAGGATTCATCAACACTCATGTTCACACCTCTCAACAGCTTGGCAGAGGAATAGCCGATGATGTTGATCTGATGACTTGGTTGCATGAACGGATTTGGCCTTATGAATCCAACATGACTGAGGAGGATTCCTACATTTCAACTTTACTCTGCGGGATCGAGCTCATTCACTCTGGTGTAACTTGTTTCGCCGAAGCTGGAGGGCAACATGTATCAGAAATGGCAAGAGCAGTGGAATTACTGGGGTTACGTGCATGTCTAGTGCAGTCAACTATGGATTCTGGCCAGGGTTTGCCACCATCTTGGGCAGATCGAACTACAGATGATTGTATTCAGTCTCAGAAGGAACTTTACGAGAAGCATCATGATACTGCAGATGGGCGCATCAGAATATGGCTTGGAATAAGGCAAATTATGAATGCAACTGATCGTTTACTACTTGAAACAAGAGATGTAGCTAAAGAACTAAAAACTGGAATCCACATGCATGTTGCAGAGATATCCTATGAAAATCAAGTTGTGAAAGATACTCGAAAAGTTGATTATGGAACAGTTTCATACTTGGAGAAGATAGATCTCCTAAATGGCAATTTGCTGGCAGCTCATACTGTTTGGGTCAATGACACTGAGATTGGTTTTCTTTCAAGAGCTGGTGTTAAAGTATCTCACTGTCCTGCTTCTGCAATGCGGATGCTAGGATTTGCACCTATTAAGGAAATGCTTGATGCTGGAATTTGTGTCTCATTGGGAACAGATGGCGCACCATCAAATAACAGAATGAGCATTGTTGATGACATGTACCTTGCTTCTCTGATTAACAAAGGACGGGAAGTTTATAAACTTGGAACAACAGATCCCACTGCTCTCCCTGCTGAAACAATCCTCAAGATGGCAACAATCAATGGTGCAAAAACAGTACTCTGGGAAAACGAAATAGGTTCACTTGAGATCGGGAAAAAGGCTGACATGATCATAATCAATCCTTTCTCTTGGTCTATGGCTCCTGTTCATGACTGCATTTCCAGCCTTGTGTATAGCATGCGATCTGAAAATATTGTCTCAGTCATGTGCAATGGCCAGTGGATCATGAAGGATGGAAAGATCTTGAACGTGAATGAGGGAGAAGTTATTTCAATGGCAAGGAAAGCTTCAAGTGAACTTCTGAAGAGGGCGGGCATTAGAATTCCTAAGAGAATGAATATGATTTGA 1410 0.4312 METKSSSVTLLHNALIVTMDSETRVFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQILLPGFINTHVHTSQQLGRGIADDVDLMTWLHERIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMARAVELLGLRACLVQSTMDSGQGLPPSWADRTTDDCIQSQKELYEKHHDTADGRIRIWLGIRQIMNATDRLLLETRDVAKELKTGIHMHVAEISYENQVVKDTRKVDYGTVSYLEKIDLLNGNLLAAHTVWVNDTEIGFLSRAGVKVSHCPASAMRMLGFAPIKEMLDAGICVSLGTDGAPSNNRMSIVDDMYLASLINKGREVYKLGTTDPTALPAETILKMATINGAKTVLWENEIGSLEIGKKADMIIINPFSWSMAPVHDCISSLVYSMRSENIVSVMCNGQWIMKDGKILNVNEGEVISMARKASSELLKRAGIRIPKRMNMI* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1531 469 SUPERFAMILY Metallo-dependent hydrolases 68 381 IPR032466 -
Vvi1g1531 469 Pfam Amidohydrolase family 65 428 IPR006680 GO:0016787
Vvi1g1531 469 SUPERFAMILY Composite domain of metallo-dependent hydrolases 10 77 IPR011059 GO:0016810
Vvi1g1531 469 CDD ATZ_TRZ_like 9 436 - -
Vvi1g1531 469 PANTHER AMINOHYDROLASE SSNA-RELATED 3 468 - -
Vvi1g1531 469 Gene3D - 69 373 - -
Vvi1g1531 469 Gene3D Urease, subunit C, domain 1 10 445 IPR011059 GO:0016810
Vvi1g1531 469 FunFam Amidohydrolase family protein, expressed 69 373 - -
Vvi1g1531 469 SUPERFAMILY Composite domain of metallo-dependent hydrolases 354 460 IPR011059 GO:0016810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1531 - - vvi:100265957 937.562