Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1528 ATGGCCGAAAGCAAGCTCGATCTGCCCGACGATCTCATCTCTACCAAGCCCTCCGATCAGTTTTGGACCGCTACAGTGGTAGCCTCTGGAGGAAACGACGATGAAAAGGCGCTTATGGGGTTAGCTGATGAGTCAAAAGATCAACTGGCATCAGAAAGCAGCATACCTTTGTCTCCTCAATGGCTTTATTCCAAACCAAACGAGACTAAGATGGAAACGCGTGCACCAAATTCTGCAGCTCTCGGAAATTCCACCGATCCCAATCAGAAGGAGGGTTGGCGTTTAGATGCATCTGAGGACAAAAAAGATTGGAGGAAGATTGCTACTGACACTGAAAGTAACCGCCGCTGGCGTGAAGAGGAAAGAGAAACAGGCTTACTTGGTGGTAGAAGAAATCTCAGGAAGGTGGATCGACGTGTTGACACTGTGTCAATCCGGGAATCCATTGACAGTCGAGCTTTGCCCACATCTGAGAGGTGGCATGATGGTAGTAACCGTAATTCTGTCCATGAAACACGGCGTGATAGTAAGTGGTCATCTAGGTGGGGTCCTGAAGAAAGAGAGAAGGAATCCCGAACTGAGAAAAGGCCAGATGTAGATAAGGAAGATGCTCATAGTGACAACCAATCTTTTGTAGGTAGCAACCGCCCGGCTCCTGAGCGTGATTCAGATTCTCGAGATAAATGGAGACCACGTCACAGGATGGAGCTTCATTCTGGTGGGCCAACTTCCTACCGGGCTGCACCTGGATTTGGTATTGAGAGAGCACGTTTGGAGGGTTCACATGTGGGATTTGCTATTGGACGTGGAAGGTCAACCGCTCTTGGTAGCACACCAGTTTTAAGGTCTTCATCTGCTGGCCCCATTGGCGGTGCTCAATTTGAGAGGAATGGAAATGTTACTGGGAAACTGAATCTCTTGGATGATACTCTTTGCTACCCAAGGGGAAAACTTCTTGACATATATCGTCGAAAAAAACTTGATCCATCTTTTGCTACCATGCCTGAAAATATGGAGGAAACACCTCATATAACACTAGGAGACTTTATTGAACCATTAGCTTTTGTCGCCCCTGATGCAGAAGAAGAGGTTATCCTTCGTGATATATGGAAAGGAAAAATCACAAGTAGTGGGGTGGTATACAATTCATTTAGAAAGGGGAGAACAACTGAAAATGTTACAGGCATTGAAGATCTGGAATCCCCCAAGGAAAAACAGGGTATACTCCCTTCAATTACAACCAAAGAGATTGCTGATACCTTTCCTGAAGGTGTAAATGATGGTGCATACCAAGATGATGACAGTGGCATCTCCTTTAATTACAACATGACGAAGAACATGATAGATGAGATGGATGCTAATCAAGGGGAAGGAAAATACAGTGTTGCTGGAATGGATGATATGATATCGACAGTTTCAAAAGGCAGCAGTTTGTGTGGTGTCTCAGAGATGAGTGGTGCCAACAGAACTGCTTCTCAGCTCAAAGCTGTTGAAAATGAGCATTTGGCCAACTCTGATTTTACCAAACATGATAAGCTTGACAACATTACCTCTGCTGCTTCTTTTGATATTGGTTGTGGGCTTCCTGATATTTCAAATTCTATATTTGCTTTGCCCTCCCCCAAGCATAGTCTAAGTAGCAATATGCAGCACTTGAACAGCACCGGTGGGACCAATCTTTTGGGAAGGGGTATCCCACCTGAGGATTTTAGTTTGCACTACCTGGATCCTCAAGGGGAAATACAGGGACCATTTCTTGGGGTTGACATCATATCTTGGTTCAAACAAGGTTTCTTTGGAATAGATTTACCTGTCCGATTGTCTGATGCTCCAGAAGGAATACCTTTTCAAGATTTGGGTGAGATCATGCCACACCTGAAAACTAAAGATGGGGCCAATAGCACTGATGCAAGTTCTGAGCTAGAACACGCTGGCATTTTGGGAGCAAACTTGGAGGCAAGTTCACCTGCTCCTGGTCCTGTTCCTGTTCCTGACATTGCAGACACAACTGCATTAAATGATCATCACTGGTCACTGTCTGAGTTTGACGGTCTCTCATCTCAGAACTTCCAGCAAAGAAAATCTGAGCGTGAAGGTCCATTGCAACTGTCATATTCTGATGGTCAAAGCTTTCATGACTTTTCTCCACAAGATGAAGAACCCGTTATGGCAAATCAGAATGACAATAAGTTGCACCAATTTGGCTTGTTGTGGTCTGAGCTTGAAGGTGCTCATCCAACGCATGCCCAGCCATCAAATCTGTCTTCCAGCATTGGAAGGCTTGGTCCCCTTGGTGCAATGGCTGGTTCAACCCCTGATGCAGAGGCATTCTCTGATGTTTATCGAAGAAATATACTTTCCAACCCCAACTCATATCAAGATGCTACAGCTACTCGCCATTTGTCCCACATTGAACAAGACTCCAACCGTTTTGATTTAGCTGAGCAGCTTATGCGCCAACAATTTCAACAACAGCTCCAACAGAGGCAGTTGCAACAGCAAAATCTGTTATCTTCTCATGCCCACTTGAATGAATCTCTTCTGGAACAAGTGGCTAGTCGGAATCACATGCACCACCAGCGCTTGGCCAATCAACCAGTGCCTGATCTGGAGCACTTGATGGCACTTCAGCTTCAACAACGGCAGCTTCAGCTACAACAAGATCATCAATTGCAACAACAGTTTCATCAAAAGCAAATGTTATTGCAGGAGCAAAAGCAGGCGCAAGCTCGACAAGCACTTCTTGAACAGTTGATGCATGGTCAAATGCACGATCCTGGCCTTAGGCAGTTCCCTATGGATCCTGTCAGAACCAACAATGGTCTTGATCAGGTTTTACTAAAGCAGCACATTCTACATGAGATACAACAGCGTTCCCACCATCCTTCGAGGCATGTTGATCCATCTCTAGATCAACTTATTCAAACAAAATTTGCTCAAACACCACAAGATGAGCATCAACGTGATATATTTGAACTCATTTCACATGCAAAGCAATCACAGATGCGTTCTTTGGAACACCAGATTTCCCACCAAGAGCAGCTCCGAGCAAGGCAATTGTCAATGGGATTGAGGCAGCGTATGGAAATGGAAGAAGAAAGGCACATGGGTACTGCTGCCTGGCCATTTGATGAAACTGCACATTTTCTCAGGTCTCCTGCTGGTACTCATCGAGTTCAGACCGCTGGGTTTAGCCCATTAGATTTTTATCAGCAACAGCAGAGGGCACCTTTGCATGAAGAGCAATTGAGTCACCTTGAGCGGAATCTTTCAATACAAGAGCGACTTCAGCGGGGGGCCTATGAGCCTGGCTCGCTGGCCTTTGAGCGGTCAATGTCTATGCCTACTGGTGCTCCAGGGATGAACCTGGATGTTGTGAATGCTATGGCTCATCCTCAAGGTTTAGATCTGCCGGATCCTAGCTCACATATGCACTCTGGTGGTCAATTAGATCCATTCTCATCTGGTTCACATCCTCGTCACCCTCAGCACCCTCTAGTTCCTAACCAATTTCATGGTTCACATTTGGATGCAACTGAAGGCCATTGGTCTGAGAGCAATGGACATTTGGCAAATGATTGGATGCAATCCCAGGTTCAACATCTGCAGCTTAATGCTGAGCGACAGAGAAGGGAGTTGGAAGTTAAAAAGAATTCTGAAGATCCTAATTCATGGATGTCTGTTGGAATCAATGATGACAAATCAAAACGCTTACTCATGGAACTGCTCCATAAGAACTGGAACCATCAGTCTACTGAGTCAGCGGACACAAGCAATGAAGTTTCTTATGAAAGAAGGGAACCTTCTGCTCACTTTTCTGGGTCAAGCTCTTCAGAACATCCATTCAGTCTTATCCCAGACCGAGGAACAGGTCTAAACAACTCGTTTGCAGCAGGATCTTATGGTTCTAATTTGGTTGGGCAATCTCATGTTAATTTAGCTGATGGACAGGGTAGCAGTTTGGAAAGCAATGAAAAATTGCCCATTAGATCCTATTCTGGATCATTGTTTATGGACAGAGAGTTCTCAGACGTGGAGGGAAAGAAGCGTAGCTCCAAGGTTGAGGGTTTTACAAAGGGGCTAATTTTTGAGAATCAAGAAGGAATGACAGAGCAAGCAGAGGTTCCAATGAATGCCATTAGCCAGCATTCTTCACTTGGCATTGCGGGTGGGGGTTCTGGTTTCTATGATGACAAGATTGGTATATCTGGTTCATTTGCAGAAGAGATTGCTAAGGATCGGGTTTCAACCATCCTATCAAAAGGGCAAGATAATCTTTTGCTACAACGTCCACCTGTCTCCAGGGTTTCGTCATCACAGGAAGCATTGTCCGAATTGGCATCTGATCCAGCTCTCAGAGGGAAAATTGTTCCAAGTGGTGGTCCTCCTGATGGGGGAAGACGAGATTTGGGTGGGAACCCAGGGAACCAAGGTTCTGAAATTCCAGCCTCAGGCAAGAAGGACGGCCATCTTCGGCGCACTTCATCTTCCAGCGAAGCTGATGTATCAGAAACAAAGTTCATAGACATGCTGAAGAGTAATGCCAAGAAACCGGCACCACAGGAGCCCCAAGGGGCGGCAGGAGCCTCGGACTCAACAGATGGAGCACAAGGGGGACGAAGTGGCAAAAAGAAAGGAAAGAAAGTGAGGCCTCTTGATTCGGCCTTCCTGGGTTTCAAGGTAACCAGCAACCGCATCATGATGGGTGAGATCCAACGCATAGATGATTAA 4731 0.4578 MAESKLDLPDDLISTKPSDQFWTATVVASGGNDDEKALMGLADESKDQLASESSIPLSPQWLYSKPNETKMETRAPNSAALGNSTDPNQKEGWRLDASEDKKDWRKIATDTESNRRWREEERETGLLGGRRNLRKVDRRVDTVSIRESIDSRALPTSERWHDGSNRNSVHETRRDSKWSSRWGPEEREKESRTEKRPDVDKEDAHSDNQSFVGSNRPAPERDSDSRDKWRPRHRMELHSGGPTSYRAAPGFGIERARLEGSHVGFAIGRGRSTALGSTPVLRSSSAGPIGGAQFERNGNVTGKLNLLDDTLCYPRGKLLDIYRRKKLDPSFATMPENMEETPHITLGDFIEPLAFVAPDAEEEVILRDIWKGKITSSGVVYNSFRKGRTTENVTGIEDLESPKEKQGILPSITTKEIADTFPEGVNDGAYQDDDSGISFNYNMTKNMIDEMDANQGEGKYSVAGMDDMISTVSKGSSLCGVSEMSGANRTASQLKAVENEHLANSDFTKHDKLDNITSAASFDIGCGLPDISNSIFALPSPKHSLSSNMQHLNSTGGTNLLGRGIPPEDFSLHYLDPQGEIQGPFLGVDIISWFKQGFFGIDLPVRLSDAPEGIPFQDLGEIMPHLKTKDGANSTDASSELEHAGILGANLEASSPAPGPVPVPDIADTTALNDHHWSLSEFDGLSSQNFQQRKSEREGPLQLSYSDGQSFHDFSPQDEEPVMANQNDNKLHQFGLLWSELEGAHPTHAQPSNLSSSIGRLGPLGAMAGSTPDAEAFSDVYRRNILSNPNSYQDATATRHLSHIEQDSNRFDLAEQLMRQQFQQQLQQRQLQQQNLLSSHAHLNESLLEQVASRNHMHHQRLANQPVPDLEHLMALQLQQRQLQLQQDHQLQQQFHQKQMLLQEQKQAQARQALLEQLMHGQMHDPGLRQFPMDPVRTNNGLDQVLLKQHILHEIQQRSHHPSRHVDPSLDQLIQTKFAQTPQDEHQRDIFELISHAKQSQMRSLEHQISHQEQLRARQLSMGLRQRMEMEEERHMGTAAWPFDETAHFLRSPAGTHRVQTAGFSPLDFYQQQQRAPLHEEQLSHLERNLSIQERLQRGAYEPGSLAFERSMSMPTGAPGMNLDVVNAMAHPQGLDLPDPSSHMHSGGQLDPFSSGSHPRHPQHPLVPNQFHGSHLDATEGHWSESNGHLANDWMQSQVQHLQLNAERQRRELEVKKNSEDPNSWMSVGINDDKSKRLLMELLHKNWNHQSTESADTSNEVSYERREPSAHFSGSSSSEHPFSLIPDRGTGLNNSFAAGSYGSNLVGQSHVNLADGQGSSLESNEKLPIRSYSGSLFMDREFSDVEGKKRSSKVEGFTKGLIFENQEGMTEQAEVPMNAISQHSSLGIAGGGSGFYDDKIGISGSFAEEIAKDRVSTILSKGQDNLLLQRPPVSRVSSSQEALSELASDPALRGKIVPSGGPPDGGRRDLGGNPGNQGSEIPASGKKDGHLRRTSSSSEADVSETKFIDMLKSNAKKPAPQEPQGAAGASDSTDGAQGGRSGKKKGKKVRPLDSAFLGFKVTSNRIMMGEIQRIDD* 1577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 1269 1286 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 92 132 - -
Vvi1g1528 1576 Coils Coil 1199 1219 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 1485 1499 - -
Vvi1g1528 1576 CDD GYF 569 627 IPR003169 GO:0005515
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 154 207 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 45 132 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 47 91 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 219 239 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 154 247 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 688 715 - -
Vvi1g1528 1576 Pfam GYF domain 573 609 IPR003169 GO:0005515
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 1430 1554 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 1250 1286 - -
Vvi1g1528 1576 SUPERFAMILY GYF domain 566 626 IPR035445 -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 1131 1188 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 688 712 - -
Vvi1g1528 1576 SMART gyf_5 570 625 IPR003169 GO:0005515
Vvi1g1528 1576 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 723 - -
Vvi1g1528 1576 MobiDBLite consensus disorder prediction 1430 1445 - -
Vvi1g1528 1576 Gene3D - 565 643 IPR035445 -
Vvi1g1528 1576 ProSiteProfiles GYF domain profile. 569 620 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1528 Vvi-Chr1 21920862 21931349 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1528 K18730 - vvi:100254102 2940.98