Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1515 ATGCAGGCAGCTTTGTGCTTCCCACGATCTACTCTCCCCCTCCTCACCCCCACCAAACCCTTCTCCTCACTCAAAAACCCCATTTCTAAGCTACAAACCTCCCCATTTCCACCCTTAAGAGCAACCTCCAAGCTCCAGGAAACCCCTTCAACAGTCGATTACAGCTCCACAACCTCTGTCTTCCCAGCAGAGGCTTGTGAGGTGGTTGGAGGGGAAGCTTGTGATGCTGAAATGTATCCAGAAGTAAAGCTCAAAGCCGAGGCCGGAAACCCTCCGGCCAGATCGGCCACAGAGGGTGTGGACAGAGAATATTTGGAGTATAACAGTCCCAAAACCGTTTTCCCAGGAGAGGCCTGTGATGATCTTGGAGGAGAATTCTGCGAACCCGAGTACCAGGAAGGAGTTTTCCAGGAGAAATAG 420 0.519 MQAALCFPRSTLPLLTPTKPFSSLKNPISKLQTSPFPPLRATSKLQETPSTVDYSSTTSVFPAEACEVVGGEACDAEMYPEVKLKAEAGNPPARSATEGVDREYLEYNSPKTVFPGEACDDLGGEFCEPEYQEGVFQEK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1515 139 Pfam Light regulated protein Lir1 1 128 IPR009856 GO:0009507
Vvi1g1515 139 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 135 IPR009856 GO:0009507
Vvi1g1515 139 MobiDBLite consensus disorder prediction 23 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1515 Vvi-Chr1 21739999 21740604 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1515 - - vvi:100245467 288.115