Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1512 ATGGCGGGATCGGTTCACTTCTCTGGTGTTAGAACTCCCTTGTTGATAAAAAAGGCGTGCTTCTCGCGCTTTCCATCGCTATCAAAATCATCAAATCGGATCGAATTCTCGGCGTCCGCCATTTCTTCTTCTGGATTATTTGCGGCATTTGGGGATGGTTGTAGAAGGAGAGTGTTGAGAGTTGGATGCAAGAAAGGAGTTGAAGCCGTGCTGAGAGAGGAAGCGAGTGAGAACGAGAGTTCGGATGACAATGTGGAGAAGTTGGCATGTGTGATGAAGTTTGGTGGATCTTCGCTGGCTTCGGCTGAGAGGATGAGAGAGGTTGCTGATCTTGTTCTTCAATTCCGTGATGAAAGGCCTGTCATTGTTCTTTCTGCCATGGGAAAGACTACTAACAATCTTCTACTGGCTGGAGAGAAGGCTGTGAGTTGCGGTGTTTCTAATGCATCCGAAATTGATGAGCTGAGTTTGGTAAAGGAACTGCATCTAAGGACTGTACAAGAGCTTGGGCTTGATAGTTCTGTTATTTCTGGACATTTAGAAGAATTGGAGCAACTTCTGAAGGGAATAGCCATGATGAAAGAGCTGACATTCCGCACAACAGACTATTTAGTTTCATTTGGAGAGTGCATGTCCACAAGAATTTTTGCAGCCTATTTGAATAAAATTGGTGCTAAAGCACGCCAATATGATGCGTTTGATATTGGCTTTATAACCACGGACGACTTCACAAATGCAGACATCTTGGAAGCAACTTACCCAGCTGTTGCAAAGAGGTTATATAATGATTGGATTAATGATCCTGCAATTCCCATTGTTACCGGTTTCCTTGGAAAGGGTTGGAAATCTGGTGCAGTTACTACCTTGGGTAGGGGTGGGAGTGATTTGACAGCCACAGCCATTGGTAGAGCCTTAGGCTTGCAAGAGATTCAGGTGTGGAAGGATGTCGATGGGGTTTTGACTTGCGATCCAAGTATTTATCCACGTGCATTGCCTGTACCATATTTGACATTTGATGAGGCAGCTGAGCTTGCATACTTTGGTGCCCAGGTCTTGCATCCACAAGCCATGAGACCCGCTAGAGAGAGTGATATTCCAGTTAGGGTCAAGAATTCTTATAATCCTGAAGCTCCTGGTACCCTCATCAATAAGACAAGAGATATGAGCAAGGCTGTACTGACCAGCATAGTTTTGAAGCGGAATGTCACCATGCTAGATATAGTTAGTACGCGGATGCTTGGTCAATTTGGCTTCCTTGCAAAGGTTTTTTCTATCTTTGAAGATTTGGGTATATCTGTGGATGTTGTTGCTACCAGTGAAGTCAGTATATCTTTGACTTTGGATCCATCAAAACTTTGGAGCCGGGAACTTATTCAGCAGGAACTTGACCATGTAGTGGAAGAGCTTGAGAAAATTGCAGTCGTGAATCTCCTACAACACAGATCAATCATCTCCCTCATTGGGAATATTCAGCGTTCTTCTCTGATTCTTGAGAAGGTGTTATATTTTTTCCCTTTGCAAAAATACTCAAAAACAATTCTGAACCATATCCATCATTACTTATGA 1566 0.4342 MAGSVHFSGVRTPLLIKKACFSRFPSLSKSSNRIEFSASAISSSGLFAAFGDGCRRRVLRVGCKKGVEAVLREEASENESSDDNVEKLACVMKFGGSSLASAERMREVADLVLQFRDERPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIDELSLVKELHLRTVQELGLDSSVISGHLEELEQLLKGIAMMKELTFRTTDYLVSFGECMSTRIFAAYLNKIGAKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLYNDWINDPAIPIVTGFLGKGWKSGAVTTLGRGGSDLTATAIGRALGLQEIQVWKDVDGVLTCDPSIYPRALPVPYLTFDEAAELAYFGAQVLHPQAMRPARESDIPVRVKNSYNPEAPGTLINKTRDMSKAVLTSIVLKRNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKLWSRELIQQELDHVVEELEKIAVVNLLQHRSIISLIGNIQRSSLILEKVLYFFPLQKYSKTILNHIHHYL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1512 521 Pfam Amino acid kinase family 90 371 IPR001048 -
Vvi1g1512 521 Gene3D - 91 382 IPR036393 -
Vvi1g1512 521 SUPERFAMILY Carbamate kinase-like 91 384 IPR036393 -
Vvi1g1512 521 FunFam Aspartokinase 403 478 - -
Vvi1g1512 521 ProSiteProfiles ACT domain profile. 407 485 IPR002912 -
Vvi1g1512 521 NCBIfam aspartate kinase 90 490 IPR001341 GO:0004072|GO:0008652
Vvi1g1512 521 CDD ACT_AK1-AT_1 402 479 - -
Vvi1g1512 521 ProSitePatterns Aspartokinase signature. 91 99 IPR018042 GO:0004072|GO:0008652
Vvi1g1512 521 FunFam Aspartokinase 193 382 - -
Vvi1g1512 521 Gene3D Aspartokinase, catalytic domain 128 224 IPR042199 -
Vvi1g1512 521 PANTHER ASPARTATE KINASE 89 501 - -
Vvi1g1512 521 FunFam Aspartokinase 128 224 - -
Vvi1g1512 521 Gene3D - 403 478 - -
Vvi1g1512 521 CDD AAK_AK-LysC-like 90 382 IPR041746 -
Vvi1g1512 521 SUPERFAMILY ACT-like 391 489 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1512 Vvi-Chr1 21705632 21715753 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1512 K00928 - vvi:100267777 960.288