Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1506 ATGGACATACAGCTCCCAAGGCCCAACTCAGTCGACACTCGACAGCCGAAAAATAAGAAAAATCTTCAGAAGCTCCGAGCATTCAGTCTTAACCGAGGATCTAGGCATTTCAATTTTTTCCTTCGATATAACCAAACCTGTTTCCACATGGATCGGACCCGATCCGATAGCACGGTTATCGGCCGACAGTGGAGCAGCGAGTCCGGCGCCACCGGCACGTCGTCTCCGGCAATGTCGCCGTCGCTTTACCACCACTCGCGGTCTGCGTCCGCCACGGGAATCTCCAACATCAAGCGGACTCAGAACTTCGCCGCCAAAGCCGCAGCTCAGCGGCTCGCGCAGGTCATGGCGTCTCAGACGGCTGATGACGATGAGGACGATGAGGATGATGATCTAGGGTTCAGGTACAGTGCTCCGCCGCCTCCGGCATTTTCCAGGACCGTCAACAGTGGGAAACCTGCTGTGCCGGCGAGTAGAGTCACTAGATCTCCTTCTCCTGGGTTAGGTCGGAACTTTGTAGAGGAAACTCCATCAGTGCGCTCAACATCTGCTGGAAGGCCTTCAATGTCTCTTAATGCAATTCCATTGGTTTCACCTAGTAGGGCACCATTGAGGACCCCAGTTCCTATACCCCCAATAGAACCTCCTAATAGGCAAAAAGAGAAAAGATTCTCATCAAATGTTGGACATTTCAACCCAAAAGATACTGGAGATCAGCGGGAGGCTTCTGCCCTTCGTGATGAAGTTGATATGCTACAAGAAGAGAATGAGAACATTCTTGACAAGCTCAGACTTGAGGAAGAGAGATGCAAGGATGCAGAGGCCAGAGTTAGAGAGCTTGAGAAACAGGTTGCTGCTCTTGGAGAGGGTGTATCTCTGGAAGCTAAATTGCTGAGCAGAAAAGAAGCTGCATTGCGTCAAAGAGAGGCTGCACTTAAAGATGCAAAACAGAGTAGGGATGGGGAAGATGAAGAAATTGCATTCCTTCGGTCTGAACTTGAGAATGCAAAGGATAGGGCTGGAGCTGTTTTGGACCAGCTTCATGGAGCCAAATCTGAAGTAAAAGCTCTTCGCTCAATGACTCAAAGGATGGTTTTGACTCAGAAAGAGATGGAGGAAGTTGTTCTTAAGAGGTGTTGGCTTGCTCGCTATTGGGGTTTAGCTGCAAGGCATGGTATCTGTGCAGATATTGCAGTGTCAAAGCATGAGCACTGGTCATCTTTAGCTCCTCTTCCTTTTGAAGTTGTTATTTCTGCTGGACAAAAAGCTAAAGAGGAGTGGAGACGAGGTGAGGATGATCCTGAGACAAGGAGCAAACTGGTTCAGGACTTGAATGATCTAACTGGAGATGGAAACATTGAGAGTATGCTTTCAGTTGAAATGGGTTTGAAGGAGCTTGCTTCCTTGAAGGTTGAGGAAGCTATTGTTCTTGCTTTGGCTCAACTGCGGCGTCCTAATTCTGCTAGACTATCCAGCTCAGATCTTAAATCACCCGGTGATCCAAAGTATATGGAAGCATTTGAATTGAGTACAGAGGAGTCTGAGGATGTTCTTTTCAAGGAGGCATGGCTTACATATTTTTGGAGAAGAGCCAAGGCCCATGGTATCGAGGAGGACATTGCCAAGGAACGTCTTCAGTTTTGGATTAGTCGTAGTGGGCATGCACCTACTTCTCACGATGCTGTTGATGTTGAGCAAGGTCTGATGGAGCTGAGGAAACTGGGTATCGAGCATTGGCTGTGGGAAGCATCACGCAAGGAAATAGACGAGGACTCCTCTGCTTCTATTGCCCGGAAATCTGCCATATAG 1809 0.4848 MDIQLPRPNSVDTRQPKNKKNLQKLRAFSLNRGSRHFNFFLRYNQTCFHMDRTRSDSTVIGRQWSSESGATGTSSPAMSPSLYHHSRSASATGISNIKRTQNFAAKAAAQRLAQVMASQTADDDEDDEDDDLGFRYSAPPPPAFSRTVNSGKPAVPASRVTRSPSPGLGRNFVEETPSVRSTSAGRPSMSLNAIPLVSPSRAPLRTPVPIPPIEPPNRQKEKRFSSNVGHFNPKDTGDQREASALRDEVDMLQEENENILDKLRLEEERCKDAEARVRELEKQVAALGEGVSLEAKLLSRKEAALRQREAALKDAKQSRDGEDEEIAFLRSELENAKDRAGAVLDQLHGAKSEVKALRSMTQRMVLTQKEMEEVVLKRCWLARYWGLAARHGICADIAVSKHEHWSSLAPLPFEVVISAGQKAKEEWRRGEDDPETRSKLVQDLNDLTGDGNIESMLSVEMGLKELASLKVEEAIVLALAQLRRPNSARLSSSDLKSPGDPKYMEAFELSTEESEDVLFKEAWLTYFWRRAKAHGIEEDIAKERLQFWISRSGHAPTSHDAVDVEQGLMELRKLGIEHWLWEASRKEIDEDSSASIARKSAI* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1506 602 MobiDBLite consensus disorder prediction 63 84 - -
Vvi1g1506 602 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 50 595 IPR040321 GO:0000911
Vvi1g1506 602 MobiDBLite consensus disorder prediction 216 241 - -
Vvi1g1506 602 MobiDBLite consensus disorder prediction 175 195 - -
Vvi1g1506 602 MobiDBLite consensus disorder prediction 115 241 - -
Vvi1g1506 602 Coils Coil 242 290 - -
Vvi1g1506 602 Coils Coil 298 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1506 Vvi-Chr1 21636760 21647604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1506 50 585 EF-hand Containing Proteins AT5G13260 63.024 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1506 - - vvi:100260846 1155.2