Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1484 ATGGCAGACTGGGGACCAGTGATTGTAGCAACGGTGCTGTTTGTGCTGCTGACGCCTGGGCTGCTGTTTCAGATACCTGCAAAAGGGAGACTGGTGGAGTTCGGGAACATGAGCACAAGTGGCCTCTCCATTCTGGTTCACGCCGTCATCTACCTTGTAGTCCTCACCATCTTCCTGATTGTTCTCGGAGTTCACATCTACACCAACTCCGGATAG 216 0.5278 MADWGPVIVATVLFVLLTPGLLFQIPAKGRLVEFGNMSTSGLSILVHAVIYLVVLTIFLIVLGVHIYTNSG* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1484 71 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
Vvi1g1484 71 PANTHER OS05G0103400 PROTEIN 1 68 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1484 Vvi-Chr1 21230998 21231213 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1484 - - vvi:100852987 140.584