Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1482 ATGTCTGCGGATTGGGGCCCAATTTTCGTTTCTGTGGTGCTGTTTGTGCTCTTGTCTCCGGGCTTGCTGTTTCAGCTGCCGGGCTCCAACCGCTGCGTGGAGTTCGGCAACTTGCGCACTAGTGGGGCCTCCATAATGCTCCATGCCCTCCTCTTTTTTGCTCTCATTTGTTTGTTCTTGTTGGGTTTTAAGATTCATTTGTATATTGGGTCTTGA 216 0.5 MSADWGPIFVSVVLFVLLSPGLLFQLPGSNRCVEFGNLRTSGASIMLHALLFFALICLFLLGFKIHLYIGS* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1482 71 PANTHER OS05G0103400 PROTEIN 3 70 IPR021775 -
Vvi1g1482 71 Pfam Protein of unknown function (DUF3339) 3 68 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1482 Vvi-Chr1 21225652 21225867 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1482 - - vvi:100262494 114.005