Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1470 ATGAGGTCTGGAAAATCTGGAACTTTGAAGACGATGGAAACTTATGAGCCTCCACCCACCAAGAAATCCCGTAAAGAGCGGAACCGGGGAAAGTTACCTGGGACGACTAATTCAGCAGAGGTAATGGAACAAGAAATCTGGAAAGAATTCCCTGAAGACCTTTTTGAAGCTGTGATTGCTAGACTTCCCATTGCCACATTCTTTCGCTTCCGTTTAGTTTGTCGGAAATGGAATTCATTGCTCAACTCCAATAGTTTCTCTCAACATTGTGCCCAAGTCCCACAAGGCCATCCTTGGTTTTACACCATCACTCATGAAAATGTTGATCCTGGAGCCATGTACGATCCTTCCTTAAAGAAATGGCACCACCCCACAATCCCTTCTCTGCGTGCAAAGACTGTCTTGCCAGTGGCTTCTGCAGGAGGCCTAGTCTGTTTCCTTGATATCAACCATAGGAACTTCTTTGTATGCAACCCTCTGACTCAGTCTTTCAAAGAGTTGCCAGCAAGATCGGTTAGGGTCTGGTCCCGAGTAGCTGTGGGAATGACACTGAACGGGAATTCAACCACTGCAGGGTATAAGATCCTGTGGGTGGGCTGTGATGGTGAGTATGAAGTTTATGACTCAGTGAAGAACTCATGGGCCCGTCCAGGAAGCATGCCCTTACATGTCAAGCTACCGCTGTCGCTAAACTTCCTGTCACAGGCCGTGTCCATTGATGGCACAATTTACTTAATGCGTTCAGACCCAGATGGAATCGTGTCATATGATATGGTTACTGGGGCCTGGAAGCAGTTCATAATCCCTGCCCCACTGCATCTGACTGACCACACACTTGCCGAGTGTGGAGGCCGTATCATGCTCGTGGGGTTGCTGACAAAGAATGCCGCCACATGCGTATGCATATGGGAGCTACAGAAGATGATGCTCTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGAGTTTTACGGAAAGCACGTTCGGATGACTTGCTTGGGCAACAAAGGATTGCTCATGCTGTCTCTAAGATCACGACAAATGAACCGGTTGGTTACTTACAATGTGTTGAGCAGGGAATGGCTGAAGGTTCCTGGATGTGTGGTGCCCCGTGGTGGAAAGAAGCGGCAGTGGATCGCCTGCGGCACGGCATTTCACCCATGCCTAACTGCTTCAGCCTAA 1191 0.487 MRSGKSGTLKTMETYEPPPTKKSRKERNRGKLPGTTNSAEVMEQEIWKEFPEDLFEAVIARLPIATFFRFRLVCRKWNSLLNSNSFSQHCAQVPQGHPWFYTITHENVDPGAMYDPSLKKWHHPTIPSLRAKTVLPVASAGGLVCFLDINHRNFFVCNPLTQSFKELPARSVRVWSRVAVGMTLNGNSTTAGYKILWVGCDGEYEVYDSVKNSWARPGSMPLHVKLPLSLNFLSQAVSIDGTIYLMRSDPDGIVSYDMVTGAWKQFIIPAPLHLTDHTLAECGGRIMLVGLLTKNAATCVCIWELQKMMLLWKEVDRMPNIWCLEFYGKHVRMTCLGNKGLLMLSLRSRQMNRLVTYNVLSREWLKVPGCVVPRGGKKRQWIACGTAFHPCLTASA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1470 396 MobiDBLite consensus disorder prediction 1 37 - -
Vvi1g1470 396 FunFam F-box only protein 6 47 86 - -
Vvi1g1470 396 CDD F-box_AtFBW1-like 49 86 - -
Vvi1g1470 396 Pfam F-box domain 48 86 IPR001810 GO:0005515
Vvi1g1470 396 SMART fbox_2 50 90 IPR001810 GO:0005515
Vvi1g1470 396 SUPERFAMILY Galactose oxidase, central domain 111 376 IPR011043 -
Vvi1g1470 396 FunFam F-box only protein 6 97 383 - -
Vvi1g1470 396 Gene3D - 47 86 - -
Vvi1g1470 396 SUPERFAMILY F-box domain 41 128 IPR036047 GO:0005515
Vvi1g1470 396 ProSiteProfiles F-box domain profile. 44 89 IPR001810 GO:0005515
Vvi1g1470 396 PANTHER BNACNNG10540D PROTEIN 25 394 - -
Vvi1g1470 396 Gene3D - 114 381 IPR015915 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1470 - - vvi:100242085 825.083