Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1467 ATGTCTCAGGTAGATAACAGGAATTCTTCAGCTGCCAAGCGAGCACGAACTGATGGTAGCAGGAGAGAAGATGATTGGACCTGTCCTAGCTGTGGCAATGTTAATTTTTCTTTTAGGACGACTTGCAATATGCGCAATTGTACCCAACCCAGACCAGCTGATCATAACTCAAAATCTGCTGCTAAGCCTGTGCAAGCTCCTCAGGGTTACTCCTCAGCTCCATATGTAGGTTCTGGTGCACCCTCTTCAATGTATCTTGGCGTGCCACCATATGGTTCTTCTCTCTTCAATGGAGCACCCATTCCTCCTTATGATGGTCCCTTTTCTGGGGGCTCTGCATATCACTACAACTATGGCAGCCGCCTTTCTGCAGGCAGTCCTTACCGACCTCTGCATTTATCTGGACCACCACCTTATTCTAGTGGGTCTATGATGGGAAATGGTGGGATGTATGGTATGCCCCCACTGGTGGACCGCTATGGCTTGGGTTTGCCCATGGGCCATGCAGCTATGGGCCCAAGACCAGGTTTTTTTCCTGATGATAAATCTCAAAAAAAAGATGCAACCCGTGATAATGACTGGACCTGTCCTAAATGTGGAAATGTCAACTTCTCTTTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAACCTGGATCACAGGCTGCAAAATCTGAGAAGAATTCTAAACAAAAGATGCCTGATGGAAGTTGGAAGTGTGAGAAGTGTAGCAACATAAACTATCCCTTCAGAACCAAGTGCAATAGACAGAACTGTGGGGCCGATAAACCATCTGAATCGACAAAGTCTCCTTCACCCTCACCGGACGAAAATGATCAGTGA 849 0.4641 MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSSAPYVGSGAPSSMYLGVPPYGSSLFNGAPIPPYDGPFSGGSAYHYNYGSRLSAGSPYRPLHLSGPPPYSSGSMMGNGGMYGMPPLVDRYGLGLPMGHAAMGPRPGFFPDDKSQKKDATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPGSQAAKSEKNSKQKMPDGSWKCEKCSNINYPFRTKCNRQNCGADKPSESTKSPSPSPDENDQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1467 282 Gene3D - 181 222 - -
Vvi1g1467 282 Gene3D - 14 54 - -
Vvi1g1467 282 Gene3D - 226 268 - -
Vvi1g1467 282 FunFam ranBP2-type zinc finger protein At1g67325-like 15 54 - -
Vvi1g1467 282 SUPERFAMILY Ran binding protein zinc finger-like 230 268 IPR036443 -
Vvi1g1467 282 MobiDBLite consensus disorder prediction 1 29 - -
Vvi1g1467 282 Pfam Zn-finger in Ran binding protein and others 191 220 IPR001876 -
Vvi1g1467 282 Pfam Zn-finger in Ran binding protein and others 237 267 IPR001876 -
Vvi1g1467 282 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Vvi1g1467 282 MobiDBLite consensus disorder prediction 259 282 - -
Vvi1g1467 282 MobiDBLite consensus disorder prediction 11 25 - -
Vvi1g1467 282 SUPERFAMILY Ran binding protein zinc finger-like 183 222 IPR036443 -
Vvi1g1467 282 MobiDBLite consensus disorder prediction 217 239 - -
Vvi1g1467 282 SMART zf_4 24 50 IPR001876 -
Vvi1g1467 282 SMART zf_4 238 264 IPR001876 -
Vvi1g1467 282 SMART zf_4 192 218 IPR001876 -
Vvi1g1467 282 SUPERFAMILY Ran binding protein zinc finger-like 17 54 IPR036443 -
Vvi1g1467 282 MobiDBLite consensus disorder prediction 50 70 - -
Vvi1g1467 282 PANTHER ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED 167 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1467 Vvi-Chr1 21055782 21062702 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1467 - - vvi:100264264 561.222