Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1464 ATGAAGAAACGCCACCTGCTCGAGAAACCGTGGTTCCTTCGCCTGGCTCTGGTCGGGTTGATCGCCGGCGTTTTGTTCATCTACCACTTCGTTCAAAACTCGGATCACTCTCTGCTCTGCTCCTTTGCAGCAGAATCACCGCGAGCTGACTCATCAGCGACGCAGATCCAGCTCAGCGCCATACTCCACTACGCCACGTCACGAATTGTGCCGCAGCAAACGCTGGCGGAGATCACAGTTTCATTCGACGTCCTACAATCACTCGCCTCCTGCAACTTCCTCGTCTTCGGCCTCGGCTTCGATTCTCTCATGTGGTCCTCGTTCAATGCACGTGGCGACACTCTGTTCCTCGAAGAGGATCCCAAGTGGGTCCAGACGGTGTTAAAAGACGCCCCTACCCTCCGCGCTCACACCGTCCGCTACCGCACGCATCTCTCCGAAGCAGACGATCTGCTCTCCACATACCGGTCCGTGCCGGAGTGCATGCCCCCCAAAGCGTACCTCAGAGGGAACAACCGGTGCAAGTTAGCACTGTCCGATCTTCCGGATGAGGTATACGATAAGGAGTGGGACCTCATCATGATCGACGCTCCGAGAGGGTACTTCCCGGAGGCGCCGGGGCGAATGGCGGCGATATTCTCCGCCGCGGTGATGGCTCGTGCTAGAGTGCGCCCTGGGGTGACGCACGTGTTTCTTCACGACGTTGATCGGAGGGTAGAGAAGGTCTATGCGGAGGAGTTACTGTGTCGGAAATATCAGGTGGGCTCTGTGGGGAGGCTTTGGCATTTTGAGATACCACCTGCGGCTAATTTGAGCCGTGCGAGTGATAGTACTGGGTTTTGCTAG 846 0.5709 MKKRHLLEKPWFLRLALVGLIAGVLFIYHFVQNSDHSLLCSFAAESPRADSSATQIQLSAILHYATSRIVPQQTLAEITVSFDVLQSLASCNFLVFGLGFDSLMWSSFNARGDTLFLEEDPKWVQTVLKDAPTLRAHTVRYRTHLSEADDLLSTYRSVPECMPPKAYLRGNNRCKLALSDLPDEVYDKEWDLIMIDAPRGYFPEAPGRMAAIFSAAVMARARVRPGVTHVFLHDVDRRVEKVYAEELLCRKYQVGSVGRLWHFEIPPAANLSRASDSTGFC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1464 281 Pfam Polysaccharide biosynthesis 77 263 - -
Vvi1g1464 281 NCBIfam TIGR01627 domain 59 281 IPR006514 GO:0045492
Vvi1g1464 281 Gene3D Vaccinia Virus protein VP39 70 276 IPR029063 -
Vvi1g1464 281 PANTHER OS11G0490100 PROTEIN 17 281 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1464 Vvi-Chr1 21034066 21034911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1464 - - vvi:100253955 570.081