Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1461 ATGTACGGATCCTATGGAGTTTCCGATGATGCAGAGCGAACCGCGTTCAGAAGAGCGGAGAAGAAGTACAAAGTCTATTACGATGACTCCAAATCTTCCAAAAAGAAAAAGCAGCTTAAACAAGTGGATTTATCAGAAGTTGTCGATTTCAAAGCCATTCTACGGTCATTCAATCAGAGCGGTGAAGTTCCTCCGGGAACTTTTGCGCTTCAATGCGATTTTGATCGTCCAGTTTTCTGTATCGAAAATCGGCCCGGGTTTTATTTCATTCCTGATGCATTGACTGTTGAGGAACAAGGCCGATGGATAAGGGAGAGCCTAATAAGTTTCCCACAGCCTTATAACAGAACAAATCACAATGCAATTTATGGGCCTATAAGGGACTTATTCATGGCAGCAAAAGAAAGAAAAATTTTGGTTGAAGAAGAGGATTCAAGTGGAGGTTTGGATTCTCTGTCTAATTCTTCTATCACAAACATGGATGCTGAGAGATGGAAATTTTATGAGGAAAATACTGTATCATCAAGAGGAAGCACATGCAAATCAATTTCAGCCTCTGTTCTGCTGCGGAAGTTGAGGTGGAGTACCCTTGGGCTGCAATTTGACTGGTCCAAGCGGAACTACAATGTCTCCTTACCACACAACAAGATCCCTGATGCACTTTGTGACCTGGCTAAAGAAATGGCAGCACCTGCGATGTCAAAGGGGAAAGTATTCCAGCCAGAAGCTGCAATAGTGAATTACTTTGGATTAGGTGATATGCTTGGGGGCCACCTAGATGACATGGAAGCAGATTGGACTAAACCTATAGTGAGCATGAGTTTGGGCTGCAAAGCTATTTTCCTTTTGGGAGGAAAATCTAGAGATGATCCACCATTAGCAATGTTCGTTCGAAGTGGTGATGTTGTACTTATGGCTGGAGAAGCAAGGGAATGCTTTCATGGCGTGCCCCGGATATTCACAGACCAAGAAAATGCTGAAATCGCCCCACTTGAACTGATGTTCTCGCATGAAGACGACGTTTGTTTCTTAGAATACATCAGAAGTTCAAGAATCAACATCAACATCAGACAAGTTTTCTGA 1083 0.4284 MYGSYGVSDDAERTAFRRAEKKYKVYYDDSKSSKKKKQLKQVDLSEVVDFKAILRSFNQSGEVPPGTFALQCDFDRPVFCIENRPGFYFIPDALTVEEQGRWIRESLISFPQPYNRTNHNAIYGPIRDLFMAAKERKILVEEEDSSGGLDSLSNSSITNMDAERWKFYEENTVSSRGSTCKSISASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDALCDLAKEMAAPAMSKGKVFQPEAAIVNYFGLGDMLGGHLDDMEADWTKPIVSMSLGCKAIFLLGGKSRDDPPLAMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIRSSRININIRQVF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1461 360 Pfam 2OG-Fe(II) oxygenase superfamily 178 357 IPR027450 -
Vvi1g1461 360 Gene3D - 153 359 IPR037151 -
Vvi1g1461 360 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 15 359 IPR004574 -
Vvi1g1461 360 SUPERFAMILY Clavaminate synthase-like 85 359 - -
Vvi1g1461 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 240 360 IPR005123 -
Vvi1g1461 360 FunFam Alpha-ketoglutarate-dependent dioxygenase alkB 150 359 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1461 K10765 - vvi:100243727 671.774