Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1456 ATGGCATCTTGCGAGATGGAGAAGCGAGAATTGAAGCATCTAGGGTTCGTGAGGATTGCTGCGATCCAGGCTCTGGTATGCGTGTCGAATCTGTACTATTACGCGAAGCAGAACTCGGGGCCTCTCAGATCAACCGTTGGAGCTGTGGAGGACGCTGTCACCGCTGTGATCTCTCCCGTTTACGATAAATTCAAGGGCGTGCCTGATCATCTCCTTGTTTTTATGGACAAGAAGGTGGATGAAGTCTCGGCCAAATTTGATAAGCACGCGCCCCCAGTAGCCAAGGAGGTTGTAGGCCAGGCCCAGTGTTTGGTTCTGAAGGCATCAAAGACAGCTCAAACGCTTGTATCGGAGGCGAAAGCTGGTGGTCCATCTGCAGCTTTGCAGCATGCCGCCACCGCGTACAAGCTGTTCATGTTGACCCAACTAGTGAAGCTGTGGTTTATCCTCAACAAGGTGCCCCTCTTCCACACGGTAGCAGATATGGCAGTACCTACAGCTGCTCACTGGTCAGATAAGTACAACCACGTAGTTACAGACATGAGCGTAAAGGGTTATACCATCTTTGGTTATTTCCCGCTAGTTCCTATTGATAAGATAGCCAAGACATTCAAGCAGAGTGAGGCTGGGAAGGAAATGGATTCTGCTGCTTCTTCTGCTGGTGAATCATCATCAGATTCAGATTAA 687 0.4964 MASCEMEKRELKHLGFVRIAAIQALVCVSNLYYYAKQNSGPLRSTVGAVEDAVTAVISPVYDKFKGVPDHLLVFMDKKVDEVSAKFDKHAPPVAKEVVGQAQCLVLKASKTAQTLVSEAKAGGPSAALQHAATAYKLFMLTQLVKLWFILNKVPLFHTVADMAVPTAAHWSDKYNHVVTDMSVKGYTIFGYFPLVPIDKIAKTFKQSEAGKEMDSAASSAGESSSDSD* 229
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1456 228 Pfam Rubber elongation factor protein (REF) 6 206 IPR008802 -
Vvi1g1456 228 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 3 220 IPR008802 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g1456 Vvi-Chr1 20940876 20942884 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1456 - K12778 vvi:100262484 424.861