Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1455 ATGTTCTGTGTGTGTGAAGCAATAGAAGGCCCGATGATTGAAGAATATGCATTTTCTTTCAGTTATTCAAATTCTGATAGTCAAGAGGTTTCAATGAATGTCAATCGCACTGGAACCAAGAAGGGAGGAACATTCAAGTGTAACTCCGCAACTGAAGTTACTCCCAATCAGATGAGGAGCTCTGCTTGTAAAATGGTCCGTACGCTGGTGCAATTGATGAGAACTCTAGATAGGATGCCAGAAGAGCGCACTATACTGATGAAACTCCTCTACTATGATGATGTGACGCCAGTGGACTATGAACCTCCTTTCTTTAGGAGCTGCACTGAAGAAGAAGCTCATATCTCATGGAACAAGAATCCTTTGAAAATGGAGGTTGGGAATGTGAACAGCAAACATCTCGTATTAGCTCTCAAGGTAAAGAGTGTGCTTGATCCTTGTGAGGATGAAAACGAAGATATCCAAAATGATGATGTGAGTTTGGGAGCTGATTCTGTACAAAGAGATGAGTATTCTGAATCTGACAGTGAGGTTAACCTTTCGCAAAGGGACCAATATATTGTTGCACCAGTAGATAAGCAGAAGCCACCTGAAGACACTGGTATGGTTGATGAAGATGATACCCAGGATTCGGTGGAAGATGAACAACAATTGAGCCGGGTGAAGGATTGGATCAGCTGTTGCCACCTTGACACCATTGAACTCACAGATGTTCTGTCAAATTTTCCCGACATCTCAGTGGTTTTGACTGAAGAAATTATGGACAAGCTTGTTAAAGAAGGTGTTCTATCAAAAACTGGAAAGGACGCTTACACCATCAAGAGGCAGAAGGAATGTGAGTATGAATTTGATGCTGTGAAAGAAGAAATGGGTGCTCAAGCACTTCCTATTAATGATAAAGTTGACCAGGCTATGGGAGAGGATCACATGTACATGAAGGCTTTGTACTATGCTCTTCCGATGAACTATGTGACAGTTCCTAAGCTTCAAAACATGCTCCAAGGACAAGCCAATCAGACTACTGTGCGCAAACTAATTGATAGAATGACCCAAGATGGATTTATTGATGCTAAAAGCAACCGAAGGCTAGGAAAGCGCGTGATCCATTCTGATCTGACTGAGAAAAAGCTAATTGAAGTCACAAAATCCTTGAACAATGAAGCTATGGATTTGGATGTCAGTGAGCCACATGACAACTCCAACCATCTAGGATTTCACACAAACGGAAGCAACCTCAAGGACATGTCCACATGCGGTGTCCTCCACTCCATTGGATCAGATCTCACGCGAATGAGAGGCAGATCAGACGTATATCAAAATGGCTCAATTAGGAGCGAGCAGACCATTTCAAAGACACTGGGGCAGGGGAACACTCCCACGAGCAGGGTTGAGGTTAGTGATTTAGTATAG 1410 0.4291 MFCVCEAIEGPMIEEYAFSFSYSNSDSQEVSMNVNRTGTKKGGTFKCNSATEVTPNQMRSSACKMVRTLVQLMRTLDRMPEERTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCEDENEDIQNDDVSLGADSVQRDEYSESDSEVNLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDWISCCHLDTIELTDVLSNFPDISVVLTEEIMDKLVKEGVLSKTGKDAYTIKRQKECEYEFDAVKEEMGAQALPINDKVDQAMGEDHMYMKALYYALPMNYVTVPKLQNMLQGQANQTTVRKLIDRMTQDGFIDAKSNRRLGKRVIHSDLTEKKLIEVTKSLNNEAMDLDVSEPHDNSNHLGFHTNGSNLKDMSTCGVLHSIGSDLTRMRGRSDVYQNGSIRSEQTISKTLGQGNTPTSRVEVSDLV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1455 469 SUPERFAMILY The spindle assembly checkpoint protein mad2 2 147 IPR036570 -
Vvi1g1455 469 ProSiteProfiles HORMA domain profile. 1 140 IPR003511 -
Vvi1g1455 469 Pfam HORMA domain 2 133 IPR003511 -
Vvi1g1455 469 Gene3D HORMA domain 1 186 IPR036570 -
Vvi1g1455 469 PANTHER HORMA DOMAIN-CONTAINING PROTEIN 1 1 465 - -
Vvi1g1455 469 MobiDBLite consensus disorder prediction 448 469 - -
Vvi1g1455 469 SUPERFAMILY "Winged helix" DNA-binding domain 317 387 IPR036390 -
Vvi1g1455 469 MobiDBLite consensus disorder prediction 150 211 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1455 K12778 - vvi:100267642 933.324