Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g1454 | ATGGCCATACTCACCTTGTCTACAGACAACTACTTTGTTGTTGCACAGAAATTGAAGGAAGCAGAGATCACTGAGCAGGATTCTCTTCTTCTGACAAGGAACCTTCTCCGTATTGCCATATTCAATATTAGTTACATCAGAGGACTTTTTCCAGAAAAATATTTCAATGATAAGTCAGTTCCAGCCTTAGAGATGAAGATCAAGAAGCTTATGCCAATGGATGCAGAGTCACGCAGGCTGATTGATTGGATGGAAAAAGGCACATTGATTCTATTGATCTGA | 282 | 0.3972 | MAILTLSTDNYFVVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDAESRRLIDWMEKGTLILLI* | 94 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g1454 | 93 | SUPERFAMILY | The spindle assembly checkpoint protein mad2 | 22 | 86 | IPR036570 | - | |
| Vvi1g1454 | 93 | ProSiteProfiles | HORMA domain profile. | 26 | 93 | IPR003511 | - | |
| Vvi1g1454 | 93 | PANTHER | HORMA DOMAIN-CONTAINING PROTEIN 1 | 12 | 87 | - | - | |
| Vvi1g1454 | 93 | Gene3D | HORMA domain | 15 | 91 | IPR036570 | - | |
| Vvi1g1454 | 93 | Pfam | HORMA domain | 28 | 88 | IPR003511 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi1g1454 | K12778 | - | vvi:100267642 | 148.673 |